Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03387 GTTCATAATGAGACACATTTACTCGGTTTCCGAAGCTTCACCTTCGCTTCGGCATCCGAACCAAAGGTCAGGGGTCCCGTTGGGTCAACTGTGGGCCTCACCGAACCACAGGAGCTGGCTTATTGACATTGGAGGATTTGCAAAGAAAGTGAAAAGAACTACTCTATCTTCAGCTGATCAAATTAAGGATTGTGGGGCTTATCGTGAATGTCCAAACTGTTCCTATCATATTGATAACAGTGATGTTTCTGTTGAGTGGCCTGGCTTTCCTCTTGGTGTAAAGTTTGATCCTTCTGATTTAGAACTCATAGAACATTTAGAAGCAAAACATGGCATTGGAAACACACAGCCACACATGCTTATCAATGAGTTCATCCCAACACTGGAAAGAGACCAAGGCATTTGCTATACACATCCAGAAAATCTCCCAGGTGCTAAGAAAGATGGGAGTTATGTCCATTTCTTTCACAGAACAATCAATGCATATGCTACTGGTCAACGAAAGCGTAGAAAGATTCATCATCAACATGATGGTGACTATGTGGTTTCAAAAGTTTTTTATCAACAGCAAAAGCAGACTGAGAAAAATGGGGAGAATCCAATGGTTGAAGATCCTGACAGTATAATATTGCGAACAAGTCCAAGGACTCCGAAACCAAACCTCCCTAATCCTCCTCGTGCAGGAAAATCTGTTGACTGTGATGATAACATTGATGAAACTGCACTTCTGTCTGATGCCCAGGATACCAAGACAATCCCTGGAGAATCACATGCCCCACAATCTGATTTGCAGGACCAATACAATGCTGGCAACACTGCATGGTTAGCTGGTGAATCACAGGCTGAGGAAAACGCTGAATACAATGGCTTGGACGACATATTATTGTGCAAGGAGATCCTAGATTCTTCTACCCTACTCAATGATTATGGATTGGACTCCATAAATGCTGATGATAATGCATGCTATGCTACCCAAATGGCTGGAAACAACAATGAATCTTATGGAATTTCTGTCCTGGATACATTGGAATTGGATACTCCTCCTGATTTTGATCTTTCTAATTGGAATTTTGACTCTCAAGACAGTATCCTTGAATGGATAGACAGTTCTTTTTGGTACCAAATCCCGGAGTTGTTCCATTCAATTGCTTGGGCAGTGCACCCTTTTCTCTCATGCTTCAGTTGTGGTTCCTCAAACTCATGCAAATTAAACTCCATGTTGGAGTTTTGGCCTTTCTTCACGTGTATTTGTCTCTTCTATGACTTGCTCAAACTTATGTTTTTCACCCATTATGCCAACCGTGGAAGTGATACTCTTTTTGGGGGTAAAATCCAATATGGTGTAGTTGATTCTGTATGTACTAGAACTAGATATCAAGATATG 1384 0.414 MRHIYSVSEASPSLRHPNQRSGVPLGQLWASPNHRSWLIDIGGFAKKVKRTTLSSADQIKDCGAYRECPNCSYHIDNSDVSVEWPGFPLGVKFDPSDLELIEHLEAKHGIGNTQPHMLINEFIPTLERDQGICYTHPENLPGAKKDGSYVHFFHRTINAYATGQRKRRKIHHQHDGDYVVSKVFYQQQKQTEKNGENPMVEDPDSIILRTSPRTPKPNLPNPPRAGKSVDCDDNIDETALLSDAQDTKTIPGESHAPQSDLQDQYNAGNTAWLAGESQAEENAEYNGLDDILLCKEILDSSTLLNDYGLDSINADDNACYATQMAGNNNESYGISVLDTLELDTPPDFDLSNWNFDSQDSILEWIDSSFWYQIPELFHSIAWAVHPFLSCFSCGSSNSCKLNSMLEFWPFFTCICLFYDLLKLMFFTHYANRGSDTLFGGKIQYGVVDSVCTRTRYQDM 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03387 459 MobiDBLite consensus disorder prediction 189 262 - -
Pste5g03387 459 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 174 264 IPR044799 GO:0003700
Pste5g03387 459 MobiDBLite consensus disorder prediction 240 262 - -
Pste5g03387 459 Gene3D NAC domain 96 192 IPR036093 GO:0003677|GO:0006355
Pste5g03387 459 Pfam No apical meristem (NAM) protein 88 172 IPR003441 GO:0003677|GO:0006355
Pste5g03387 459 SUPERFAMILY NAC domain 71 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03387 Pste-Chr5 27278424 27282386 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03387 68 176 NAC Transcription Factor Family AT1G28470 53.509 9.71e-32 122