Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03365 ATGGAGAAAGAGGTTGTGGAAAACCTTTGGAATGGTGACACAAAAATGCAAGTTCAAGCAGCTGTGGAACTAAGGAAACTCAACAGAAAGCAGAGGCACAATTTGGTTGAAAGTGGAGTTATGGTGCCTCTAATTTCCATGCTTCATTATGAAAATTTTGAAGCCATTGAAGCTGCTCTCTGTGCTTTGCTTAGCCTTGCCTTTGGAAGTGAAAGAAACAAGTCAAGGATCATCAACTCAGGAGCATTGCCAGTGTTGCTGAATCTCTTCCATTGTGAAAGTGAGACAGTGCTGGAATTGAATGTAGCAACATTGCTAACAATCTCTTCATGCAACTCAAACAAGGTAGCAATTGCTTCCTCTGGTGCTATCCAACTCTTGGCTCAATTTCTCAACACCACAAGTAGCACTCAGTCTCAGCTAGATACATTAGCCACTCTCCACAACCTCTCAACATGCCAAGAGATCATTACTCCATTCATTGTCTCTTCTGGGGTCATACTTTCCTTGCTTGAACTTATCCACAGATCAGAAAAATCATCCACATTGGTTGAGAAAGCAATTGGGTTGCTAGAACACATTGTCACTTCATCAAAGAGTGGACTGTGTGAGGCTGCTAGTATTGGGGGAGCAGTTAGGACCTTAGTGGAGACTATTGAAGATGGTTCATTTCAAAGCAAAGAACATGCAGTAGGAACACTCCTACTTTTCTGCCAAAGTTGGAGAGAAAAATATAGAGAAATGATCTTGAGAGAGGGAGTGATGCCAGGGTTGCTTCAGCTAAGTGTGGATGGAACTTGGAGGGCCAAAAATTTAGCTAAGAAACTTTTGCTGCTTCTCAGGGATTGTTCCAATTATAGTTCAACAAGTAAACAGATTGATCATGAGGTTGTAGAACGGATCATGGAAGAAATTGATGATGCAGAAGGGGAGGAAGTGGCAGAGACTACTTTGAGAATGGTAGAGGAGATGGTTGCAAAACTTAGTACCTAA 993 0.4189 MEKEVVENLWNGDTKMQVQAAVELRKLNRKQRHNLVESGVMVPLISMLHYENFEAIEAALCALLSLAFGSERNKSRIINSGALPVLLNLFHCESETVLELNVATLLTISSCNSNKVAIASSGAIQLLAQFLNTTSSTQSQLDTLATLHNLSTCQEIITPFIVSSGVILSLLELIHRSEKSSTLVEKAIGLLEHIVTSSKSGLCEAASIGGAVRTLVETIEDGSFQSKEHAVGTLLLFCQSWREKYREMILREGVMPGLLQLSVDGTWRAKNLAKKLLLLLRDCSNYSSTSKQIDHEVVERIMEEIDDAEGEEVAETTLRMVEEMVAKLST 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03365 330 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 194 IPR000225 GO:0005515
Pste5g03365 330 SMART arm_5 70 110 IPR000225 GO:0005515
Pste5g03365 330 SMART arm_5 111 152 IPR000225 GO:0005515
Pste5g03365 330 SMART arm_5 28 68 IPR000225 GO:0005515
Pste5g03365 330 SMART arm_5 153 196 IPR000225 GO:0005515
Pste5g03365 330 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Pste5g03365 330 FunFam U-box domain-containing protein 4 3 198 - -
Pste5g03365 330 Gene3D - 1 158 IPR011989 -
Pste5g03365 330 PANTHER U BOX DOMAIN-CONTAINING 4 283 - -
Pste5g03365 330 Gene3D - 159 329 IPR011989 -
Pste5g03365 330 FunFam U-box domain-containing protein 4 202 319 - -
Pste5g03365 330 SUPERFAMILY ARM repeat 4 311 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03365 Pste-Chr5 26912994 26915056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03365 3 282 U-box Gene Family AT2G23140 33.217 3.56e-28 113