Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03357 AAAAAATTGCAGTGCGAGCCCTGAGCCCTGAGCCCTCAGCCCTCGCAGCGCACACAACACACATCTTTGTATCCCAAACATGGAACCTAATGACAACCAACTCACCTCCTTCTTCCACCACCATCACCACCACCACCAGCAGGCTCCACCACCGCCACCTCCACCGCCGCAGACCGCGCCGTCCCCCACCAACGGTCTCTTGCCCAACGCCGATGGGTCCCACATACTGTACCCTCACTCGGTTGCTTCCGCGGTGTCGTCCCAGCTGGAACCGGCGAAGCGGAAGCGTGGGCGGCCGAGGAAGTACGGCACCCCGGAGCAGGCACTCGCCGCCAAGAAAGCCGCTACGACGTCGTCTCAGTCGTTCTCTGCCGACAAGAAGCCCCACTCTCCCTCCTTTCCTTCTTTCGCTTCCAAGAAATCCCATTCCTTCTCTCTAGGCAATGCAGGCCAAGGCTTCACTCCCCATGTCATTTCTGTTGCTGCCGGTGAGGATGTTGGGCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGGGAGATGTGTATTCTGTCTGCATCTGGTTCAATCTCTAATGCCTCTCTTCGCCAGCCAGCAACCTCAGGAGGCAACATTACATATGAGGGGCGGTTTGAGATTATTTCACTAACTGGTTCTTATGTCCGTAATGAACTTGGAACTCGAACTGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGACAAATCATAGGTGGTGGGGTTGGTGGGCCACTTAAAGCAGCGGGTCCAGTTCAGGTTATAGTTGGAACATTTTTTATTGACAAGAAAGATACTGGTACTGGTATAAAAGGTGATGCCTCTGCCAGCAAGTTGCCTTCCCCAGTTAGTGAACCAGTATCTAGTTTAGGTTTCCGCCAATCAGTCGACTCTTCCAGCGGAAACCCAATTCGCGGAAATGATGAGCAGCATCAAACTATGGGGGCAAGTCATTTCATGATTCAACAGCTAGGTTTGCATGGTACGCCTCCCCGGTCCACAGACTGGGGTCGTCCAGATTCAAGAAACACCGGTTTTGAGCTGACAGGAAGGACAGGTCATGGGGTGCACCAGTCTCCTGAGAATGGGGGCTATGAGCAAATTCCCGATTGAAAAATCAAGATGGCATTTAGATTTGATAGCAATTATCAATGTGCGATAGATGTATGATATATCTCTACATACCGGCAGTCTCTGTCACATGATGCTGTTTATAGTATGCACCATTCATTAAGGATCGTGGCTTCTGAAAATTAATACTCATGCTTCTCTTGACAATGTTGTTCTACCTCATTTAGTCATGTTGTATTCATAAATCAAGGTTGCTTACTTCATTTTTGCTGGCCTGTTAGTTTATACCGGGATAAATATGATAGAAATATGTTTATTAGATTAGCTAATCTATTGTGGATTATATTTTCCTTCCATTTTCAAGGTGCTGTCTTCAGATTGTTCAAAATTCTGTCAAGTATGGATTATTATGGTTATTTATTTAAGCCTTTTTTTCTGCTCAC 1533 0.4729 MEPNDNQLTSFFHHHHHHHQQAPPPPPPPPQTAPSPTNGLLPNADGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSADKKPHSPSFPSFASKKSHSFSLGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGTRTGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDKKDTGTGIKGDASASKLPSPVSEPVSSLGFRQSVDSSSGNPIRGNDEQHQTMGASHFMIQQLGLHGTPPRSTDWGRPDSRNTGFELTGRTGHGVHQSPENGGYEQIPD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03357 350 MobiDBLite consensus disorder prediction 261 290 - -
Pste5g03357 350 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 277 IPR039605 GO:0003680
Pste5g03357 350 MobiDBLite consensus disorder prediction 309 350 - -
Pste5g03357 350 CDD DUF296 128 239 IPR005175 -
Pste5g03357 350 ProSiteProfiles PPC domain profile profile. 123 263 IPR005175 -
Pste5g03357 350 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 239 IPR005175 -
Pste5g03357 350 MobiDBLite consensus disorder prediction 85 115 - -
Pste5g03357 350 MobiDBLite consensus disorder prediction 250 290 - -
Pste5g03357 350 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 239 - -
Pste5g03357 350 Gene3D - 129 253 - -
Pste5g03357 350 MobiDBLite consensus disorder prediction 22 36 - -
Pste5g03357 350 MobiDBLite consensus disorder prediction 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03357 Pste-Chr5 26778304 26784863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03357 33 350 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 51.831 3.91e-89 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03357 5 26778304 26784863 Pste5g03357 5 26778304 26784863 ECH