Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03347 ATGCCGAGTATATTGGCAACATCCATATTTTCAGCACAGAGTGGCGAGACTGTGGCATTCTCTAGGAATGCACTATTTTTGCTTCTTCTGTGTTTAACTTCAGGGATATGCAGTGGTGTGCGAAGTGGTTGCTTTGAAATTTTGAACGTAACCTTGGTAAAGCGTCTACGAGAAAACTTATATACAACAATTCTTTTTCAGGTTGACCTATTGCCTATGCTTGTATTCTCTGGAACTGGAGCAATAATTAATTTGATGGCTTTATCTTGGCCACTGGCACTGTCTGCCTTAGTGATGTGCTGTATTTTATCTGCAATTTTCCTGGTTTATGGCCGGTATCAGAGGCAGGCAGCAAAGTTAATCCAAGATTTCACAGCTTATGCCAATGACGTTGCTCAGGAGACACTTTCTTCAATAAGAATTGTCCGAGCTTATGGAACAGAAGAAAAAGAATTTGGAAGGTATAACCAATGGTTAGAGAGCTTAGCATTTATAAATGTTCGAGAGAGTGTGGCTTCTGGCTTCTGGAACCTGATTTTCAACACCTTGTACCGTTCAACTCAGATATTAGCAGTGCTGTTAGTAGGAATGTCTGTTCTCAGACGTCATGTAACTGTGGAACAACTTACCAAGTATGTACTATACTGTGAGTGGTTGATTTATGCTACCTGGAGGGTGACAAACAGCTTAACATCATTACTGCAGTCCATTGGAGCATCTGAACAAATTTTCCAACTGATGAATCTTTTGCCAAGTGACCAATTCTTAGCCAAAGGCAAGAGTGAAGTTGCAGAGATGCCTGTTCTAGAACACTTAAACTTCTCCATAGAAGCAAATCAAGTCATTGCCATTGTAAGGGAGAAACAAAGCAACGCTGACGATAAAGCACTCGCCGGTGATCTGGCCAGACCGCGACGGCGACAGGGACGTGGGCGCTGCCGACGCGACGACAATGACGGACAAGACAAGCGACAGCGAGCGAGGGGAGGGACACGTGACGATCGGATATACATTGATGGGTTCCCTCTTAAAGATTTGGATATCAGGTGGCTGCGGCAACACATTGGATATGTTGCACAGGAATCCCATCTCTTTCACATGGACATCAAGTCAAACATACAATATGGTTGCCCCACGAACACAAAACAAGAAGATATTGAATGGGCAGCAAAAAAGGCCTATGCCCATGACTTTATTTCTTCACTTCCTAATGGATATGAAACCCTTGTTGATGACAATGCACTTAGTGGTGGACAAAAGCAGCGAATTGCCATCGCCAGAGCCATTCTTAGGGACCCTGCTATTATGATACTTGATGAAGCTACCAGTGCTCTAGATTCTGAAAGTGAGCATTATATCAAGGAAGTGCTGTATGCGCTAAAAGATGAATCTAAAACAAGAACTATCATTATCATAGCACATAAGTGA 1428 0.4286 MPSILATSIFSAQSGETVAFSRNALFLLLLCLTSGICSGVRSGCFEILNVTLVKRLRENLYTTILFQVDLLPMLVFSGTGAIINLMALSWPLALSALVMCCILSAIFLVYGRYQRQAAKLIQDFTAYANDVAQETLSSIRIVRAYGTEEKEFGRYNQWLESLAFINVRESVASGFWNLIFNTLYRSTQILAVLLVGMSVLRRHVTVEQLTKYVLYCEWLIYATWRVTNSLTSLLQSIGASEQIFQLMNLLPSDQFLAKGKSEVAEMPVLEHLNFSIEANQVIAIVREKQSNADDKALAGDLARPRRRQGRGRCRRDDNDGQDKRQRARGGTRDDRIYIDGFPLKDLDIRWLRQHIGYVAQESHLFHMDIKSNIQYGCPTNTKQEDIEWAAKKAYAHDFISSLPNGYETLVDDNALSGGQKQRIAIARAILRDPAIMILDEATSALDSESEHYIKEVLYALKDESKTRTIIIIAHK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03347 475 Pfam ABC transporter 334 443 IPR003439 GO:0005524
Pste5g03347 475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 75 235 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g03347 475 PANTHER ABC TRANSPORTER B FAMILY 335 475 IPR039421 -
Pste5g03347 475 Pfam ABC transporter transmembrane region 75 217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g03347 475 SUPERFAMILY ABC transporter transmembrane region 15 253 IPR036640 GO:0005524|GO:0016020
Pste5g03347 475 ProSitePatterns ABC transporters family signature. 415 429 IPR017871 GO:0005524|GO:0016887
Pste5g03347 475 Gene3D - 335 475 IPR027417 -
Pste5g03347 475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 244 474 IPR003439 GO:0005524
Pste5g03347 475 MobiDBLite consensus disorder prediction 295 331 - -
Pste5g03347 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 475 IPR027417 -
Pste5g03347 475 Gene3D ABC transporter type 1, transmembrane domain 3 250 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03347 Pste-Chr5 26721868 26741773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03347 79 475 Calmodulin-binding Proteins AT2G36910 31.311 1.91e-38 147