Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03330 ATGGTTGAGTTTTTGTCATTCATATTAACTCTCTTTTCAGGCCTTGCTTTTGTTTTTCTTTTCAAATATCTTAACAAAAACAATGAAGATACTCCACAGAAATTGCCACCTGGTAGCATGGGGTGGCCCTTTTTTGGGGAAACACTAAGCTTCCTCAAACCTCATAGATCAAACTCCTTGGGGAGTTTCTTACAAGAACATTGCTCTAGATATGGCAAAGTTTTCAAGTCTCATCTGTTTGGTTCTCCCACCATAGTTTCATGTGACTTTGAGTTCAACATGTATATTCTTCAGAATGAAGGAAAATTATTCCCTGTTGATTACCCCAAGGTAATGCACAAGATCCTGGGGAAGTTCTCTCTGCTTATTGTCAAAGGAAACCTTCACAGGAAGCTGAGAAGCACTGTAGTCAGTTTTGTCAGTGCTACAAAGTATGAATCCAATTTCCTTCACTGTGTGGAAATGCTTGCACTCTCAAGGATTAATTCATGGAATCCAATCTCTAAACAAGTGGCTTTCTATGAAGAAGCTAAAAGGTTTACTATCAATGTTATGATGAAGCATCTCCTGAACATTAATCTTGATGAGCCACTAGCCTTCAAGATTTTGGGACACTTTGAGAACTACATCAAAGGCTTTATTTCATTGCCAATAAATATACCCGGGACTGCATATTTCAAAGCTTTGCAGGCTAGAATAAGACTTTCAGCCATCATCAAAGAAATTATATTAGAGAGGCGTAAATATAATAATATGAAGGCATTGGAAGGAGGAGACCTCTTGAATGTGATTTTGTCAAATCAAAACCTAAGTGATGAAGAGATGGTGAGCATCGTGTTGGACCTTTTGTTTGGGGGTTATGAGACAACTGCAAAACTTCTCTCTTTAGTTGTCTATTTTCTTGGTGGAGCCTCTCATGTTTTAGAAAGCTTAAAGGAAGAACACCAAGAGATAAGGAAGAGAAAAAAGGAGGGGGAACTACTTAATTGGGAAGATTATAATCAAATGGAGTTCACTCAAAATGTGATGTATGAAGCTATGAGATTTGGTAATGTAGTCAAATTTTTGCACAGGAAAGCTGTTCAAGATGTCAAATTCAAAGATTATGTGATACCTGCAGGGTGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATACCACCCTTTTTGAAAATCCTTTGGAGTTCGATCCCTTTCGGTGGAATGACAATTCGACAAGCAAGAAAGTTGCACCATTTGGTGGGGGTCCACGGCTCTGTCCAGGGGCTGATCTAGCAAAAGTGGAGACAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATAAAGCCAGATGATCCCCCACTTGCTTTTCCATATGTGGAATTCACTAAAGGGCTACTATTGGATCTTGAACCCACTTTCTCTACTTTTGGGGAACACCTTTGATTACATTTTGGGTTTCATGAGCAGAAAAATGGA 1473 0.3897 MVEFLSFILTLFSGLAFVFLFKYLNKNNEDTPQKLPPGSMGWPFFGETLSFLKPHRSNSLGSFLQEHCSRYGKVFKSHLFGSPTIVSCDFEFNMYILQNEGKLFPVDYPKVMHKILGKFSLLIVKGNLHRKLRSTVVSFVSATKYESNFLHCVEMLALSRINSWNPISKQVAFYEEAKRFTINVMMKHLLNINLDEPLAFKILGHFENYIKGFISLPINIPGTAYFKALQARIRLSAIIKEIILERRKYNNMKALEGGDLLNVILSNQNLSDEEMVSIVLDLLFGGYETTAKLLSLVVYFLGGASHVLESLKEEHQEIRKRKKEGELLNWEDYNQMEFTQNVMYEAMRFGNVVKFLHRKAVQDVKFKDYVIPAGWKVLPVLSSGHLDTTLFENPLEFDPFRWNDNSTSKKVAPFGGGPRLCPGADLAKVETAFFLHHLVLNYRWKIKPDDPPLAFPYVEFTKGLLLDLEPTFSTFGEHL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03330 479 PANTHER CYTOCHROME P450 26 33 447 - -
Pste5g03330 479 Coils Coil 308 328 - -
Pste5g03330 479 FunFam Cytochrome P450 724B1 30 469 - -
Pste5g03330 479 CDD CYP90-like 67 470 - -
Pste5g03330 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Pste5g03330 479 SUPERFAMILY Cytochrome P450 32 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 Gene3D Cytochrome P450 24 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste5g03330 479 Pfam Cytochrome P450 36 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03330 Pste-Chr5 26482331 26488174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03330 40 366 Cytochrome P450 AT5G14400 55.623 5.89e-129 375