Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03303 ATGGTCCTGTTTCCTCATCATTTGCATTTGCAGGGGACTCCGATGAACATTATTGCAGGTTCTCATGTCTGGATTGAAGATCCACGTGTTTGTTGGATTGATGGACTGGTTTTAAAAATCAAAGGCAATGATGCCGAAATTGAAACAACCGATGGAAATAAGGTTGTTGCAAAGTTGTCAAAAATATATCCCAAGGATACAGAAGCTCCTGCAGGTGGAGTGGATGATATGACTAAGCTTTCCTATTTGCATGAGGCTGGAGTCCTGCAGAACTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGGAATATTCTGATTGCAATAAATCCATTCCAAAGACTACCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCGCCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTCACGAAGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACAGAAACTACAAAAATGCTTATGCGATATCTTGCTTTCTTAGGAGGTAGGACTGCCACTGAAGGACGAACCGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGAAATAATAATTCCAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAGATTAACGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCACAGGAGGAAATAGAGAAATACAAATTAGGAAATCCTAAAACATTTCATTACCTTAACCAATCAAAATGCTATCAACTGGATGATATTAGTGATTCCCATGAGTATCTTGCCACTAGGAGAGCTATGGATATTGTTGGAATAAACCAAAAAGAACAGGAAGCAATTTTCAGAGTTGTTGCGGCAATTCTACATATTGGGAATATTGATTTTGCCAAAGGAAGGGAAATTGATTCATCAATTCCAAAAGACGAAAAATCCAAGTTCCACTTAAAAACAACTTCTGAGCTTCTTATGTGCGATGCTGGTGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAGGAAGTCATAAAACGGAGCCTTGATCCTGACAGTGCCGCAGTCAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGACTGGTTGGTGGACAAGATTAATAATTCAATTGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATGTAACAGCCTATCATGCTCTGCACATGTGTTTAAGATGGAACAAGAAGAATACACGAAGGAGAAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTTCACTCCTTGACGAAGCTTGCATGTTTCCAAAGTCCACACATGAAACATTTTCAAACAAACTTTATCAAACATTTAAGAATCACAAGCGCTTTGTTAAGCCAAAATTGTCTCGAACAGAATTCATTATTTCTCATTATGCAGGCGAGGTGCAGTACCAGTCTGACCATTTTATAGACAAAAACAAGGATTATGTGGTTCCCGAACATCAAGATTTATTGAGTGTTTCCAAATGTCCTTTTGTAGCAGGCCTTTTTCCTCCACTCCCAGAAGAGACATCCAAGTCTTCAAAATTTTCTTCAATTGGTTCACGATTTAAGCTGCAACTACAGCAATTAATGGAAACACTAAGCTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTACTCAAGCCTGCAATTTTTGAGAATGCCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAAGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTGTAAACCGATTTTCCCTTCTTGCTCCAGAGATCACAGAAGCACACCACAATGAGAAGACTGTTTGCCAAAAGATTCTGGAAAAAGTGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCGGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCATATACTCAGTAGCGCAGCGAAAACTATCCAACGGCGTATACGAACCCATCAAGCTCGAATACATTATCTTGCACTAAGAAAGAAGACTATATATGTGCAGTCTCTGTGGAGAGGTAAACTTGCATTCAAACTTTACAAGAACAAGAGGAGGGAGGCGGCTGCTCTGAAAATTCAGAAGAACATACGCAGATATAATGCTAGGAAAACCTATGTTAAACTCCAAGAATCAGTTCTTACTTTGCAAACAGCTTTAAGGGCAATTGCTTCCATTAAGGAGTTAAGATTTAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTTCTTATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACACAAAGCCGATGGAGGGGGCGCATGGGCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCACTTAAAGACGCAAAGGACAAACTTGAAAAAAGAGTGGAGGAACTCACTTGGCGTCTTCAACTAGAGAAAAGTTTAAGGACCAACCAAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAAATCACTGCAGGATATGCAGAATAAAGTTGACGAAACCACTGCATTGCTTATAAAGGAGCGAGAGAATGCAAAGAAGGCTATTGAAGAAACACCTCCTGTCATTAAAGAAATTCAGGTTATTGTTGAAGATACTCAAAAGATTGAATCACTAACGGTGGAAGTTGAGAATTTAAAGACATCCCTTGAGTCAGAGAAACAGAAAGCTGACGACTTTCAGAGGAAATATAATGAAGCCCAAGTTTGTAGCGAAGAAAGTAGTAAAAAATTAGAAGACTCGGAGAACAAGGTTCATCAGCTCCAAGAATCCTTGACCAGGCTAGAAGAGAAAATTACTAATTTAGAATCAGAGAACCAGAGAACGGACAGTGGACATATTGGAGTTGATGCAAAGACAAATTTGGATATGCATAGCACATCAATGAACCACAGGGAATCGTCTGAACTGGAGGATAAACCACAGAAGTCCCTAAATGAGAAACAACTTGAGAACCAAGAGTTACTCATTAGATGCATTACACAACCCCTAGGCTTTGCTGGGAATAGACCAATATGTGCTTGTATCGTATACAAATGCCTCTTGCATTGGAGATCCTTTGAAGTTGACCGTACCAGTGTTTTTGATCGATTAATTCAAACTATTGGTCATACGATTGAGACCCAGGAAAACAATGATGTGTTGGCTTATTGGTTATGCAACACCTCTACACTTGTATTGCTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATAGCTCCTCAACGTCGTCGATCTTCATCAGGGACCCTGTTTGGGAGGATGACACATAGTTTCCGCGGAAGTCCAGCAGGAGTCCATCTTTCCCTAATAAATGGTAGCATGAGCGGTGGTGCAGATACATTAAAAGTTGATGCCAAGTACCCTGCTCTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATACGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATTCAGGCTCCCAGAACATCCAGAGCGAGCTTGGTTAAGGGGGCATCACGATCTGCTGCAAACACTGAGGCCCAAAAAGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTAGAAGCTTCTTAGATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCTTTCATCAATGTCCAACTTTTTAATAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGTAATGGAGAATATGTGAAATCTGGTTTGTCTGAATTGGAGGATTGGTGCTCTGAGGCCACAGATGAGTACGCTGGTGCAGCTTGGGGTGAGCTCAAACATATTAGACAGGCTATTGGATTTTTGGTCGTGCATCAGAAACCAAGGAAAACGCTGAATGAAATAAGTCATGACCTGTGCCCAGTACTCAGTATACAGCAGCTATATCGGATTAGCACCATGTACTGGGATGACAAGTATGGCACACATAGCGTATCGCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGACATATCGAAGTCGAAGGAACAGATCGATATCTCTGATATAGACGCCCCACCACAAATACGTGAAAACACTGGTTTTAGTTTCTTATTGCCGCCCCCAGACACACAGCAGAATTGACCATTGTCGAGGCATCAAATCATATTCAGTTAGATTTTATTTTTGGGGAAACTGAATATTTTTGTGATTTGGTTACCTCAGAAATAATATTGTATTTAATATACGAAATTTATTTCTTTGTTGTTTGAAAAGGGGATACATAGAGCAGATCAAGCGGGGCGCAACTAACTTTTGGGTGGGAGTCAAGTGTCTTTTTCCATGAAAATTTTCCCTTTTATCCAGATTTGACACTCGTTGGCACCATCTTTATTCTTAGGATAAGATTTTGTACCTAGGAGCATAGGAATTTCACCAAATTATACAGTAATGAATGATGATTGCCCAAGGCCCCAGTTTCTGTCAACAAAATACATTATTTATAGACTTCCA 4884 0.4009 MVLFPHHLHLQGTPMNIIAGSHVWIEDPRVCWIDGLVLKIKGNDAEIETTDGNKVVAKLSKIYPKDTEAPAGGVDDMTKLSYLHEAGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRTATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYFLCAAPQEEIEKYKLGNPKTFHYLNQSKCYQLDDISDSHEYLATRRAMDIVGINQKEQEAIFRVVAAILHIGNIDFAKGREIDSSIPKDEKSKFHLKTTSELLMCDAGALEDALCKRVMITPEEVIKRSLDPDSAAVSRDGLAKTIYSRLFDWLVDKINNSIGQDSNSKSLIGVLDIYGFESFKCNSLSCSAHVFKMEQEEYTKEKINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSNKLYQTFKNHKRFVKPKLSRTEFIISHYAGEVQYQSDHFIDKNKDYVVPEHQDLLSVSKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLSSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFSLLAPEITEAHHNEKTVCQKILEKVGLKGYQIGKTKVFLRAGQMAELDARRAHILSSAAKTIQRRIRTHQARIHYLALRKKTIYVQSLWRGKLAFKLYKNKRREAAALKIQKNIRRYNARKTYVKLQESVLTLQTALRAIASIKELRFRKQTKASIIIQARWRCHKAASYYKKLKKGSIVTQSRWRGRMGRKELRKLKMAARETGALKDAKDKLEKRVEELTWRLQLEKSLRTNQEESKAQEIAKLQKSLQDMQNKVDETTALLIKERENAKKAIEETPPVIKEIQVIVEDTQKIESLTVEVENLKTSLESEKQKADDFQRKYNEAQVCSEESSKKLEDSENKVHQLQESLTRLEEKITNLESENQRTDSGHIGVDAKTNLDMHSTSMNHRESSELEDKPQKSLNEKQLENQELLIRCITQPLGFAGNRPICACIVYKCLLHWRSFEVDRTSVFDRLIQTIGHTIETQENNDVLAYWLCNTSTLVLLLQRTLKASGAAGIAPQRRRSSSGTLFGRMTHSFRGSPAGVHLSLINGSMSGGADTLKVDAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSAANTEAQKALIAHWQGIVKSLRSFLDTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLSELEDWCSEATDEYAGAAWGELKHIRQAIGFLVVHQKPRKTLNEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSKEQIDISDIDAPPQIRENTGFSFLLPPPDTQQN 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03303 1504 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 18 67 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 ProSiteProfiles IQ motif profile. 850 879 IPR000048 GO:0005515
Pste5g03303 1504 FunFam unconventional myosin-Va 829 877 - -
Pste5g03303 1504 PRINTS Myosin heavy chain signature 206 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 PRINTS Myosin heavy chain signature 159 184 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 PRINTS Myosin heavy chain signature 439 467 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 PRINTS Myosin heavy chain signature 102 121 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 FunFam Myosin 2 322 440 - -
Pste5g03303 1504 Coils Coil 971 998 - -
Pste5g03303 1504 Gene3D - 449 619 - -
Pste5g03303 1504 ProSiteProfiles Dilute domain profile. 1131 1443 IPR002710 -
Pste5g03303 1504 Coils Coil 1006 1047 - -
Pste5g03303 1504 Gene3D Myosin VI head, motor domain, U50 subdomain 322 597 - -
Pste5g03303 1504 Coils Coil 873 907 - -
Pste5g03303 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 781 IPR027417 -
Pste5g03303 1504 ProSiteProfiles IQ motif profile. 827 854 IPR000048 GO:0005515
Pste5g03303 1504 Gene3D - 829 878 - -
Pste5g03303 1504 Gene3D - 731 780 - -
Pste5g03303 1504 Gene3D - 781 828 - -
Pste5g03303 1504 SMART DIL_2 1318 1425 IPR002710 -
Pste5g03303 1504 Pfam Myosin N-terminal SH3-like domain 19 61 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 Gene3D - 262 320 - -
Pste5g03303 1504 ProSiteProfiles IQ motif profile. 779 808 IPR000048 GO:0005515
Pste5g03303 1504 Pfam DIL domain 1319 1422 IPR002710 -
Pste5g03303 1504 CDD MyosinXI_CBD 1082 1466 IPR037975 GO:0007015
Pste5g03303 1504 ProSiteProfiles Myosin motor domain profile. 72 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 Pfam IQ calmodulin-binding motif 733 751 IPR000048 GO:0005515
Pste5g03303 1504 Pfam IQ calmodulin-binding motif 781 799 IPR000048 GO:0005515
Pste5g03303 1504 Pfam IQ calmodulin-binding motif 828 848 IPR000048 GO:0005515
Pste5g03303 1504 Gene3D Kinesin motor domain 75 658 IPR036961 -
Pste5g03303 1504 SMART iq_5 849 871 IPR000048 GO:0005515
Pste5g03303 1504 SMART iq_5 826 848 IPR000048 GO:0005515
Pste5g03303 1504 SMART iq_5 730 752 IPR000048 GO:0005515
Pste5g03303 1504 SMART iq_5 753 775 IPR000048 GO:0005515
Pste5g03303 1504 SMART iq_5 778 800 IPR000048 GO:0005515
Pste5g03303 1504 Pfam Myosin head (motor domain) 74 716 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 879 IPR027417 -
Pste5g03303 1504 ProSiteProfiles IQ motif profile. 731 758 IPR000048 GO:0005515
Pste5g03303 1504 PANTHER MYOSIN 64 1431 - -
Pste5g03303 1504 SMART MYSc_2a 66 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste5g03303 1504 ProSiteProfiles IQ motif profile. 754 783 IPR000048 GO:0005515
Pste5g03303 1504 Gene3D - 663 729 - -
Pste5g03303 1504 FunFam Myosin heavy chain 262 317 - -
Pste5g03303 1504 Coils Coil 912 946 - -
Pste5g03303 1504 CDD MYSc_Myo11 86 716 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03303 Pste-Chr5 26246589 26260146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03303 12 1500 Myosins gene family AT1G54560 77.632 0.0 2494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03303 5 26246589 26260146 Pste5g03303 5 26246589 26260146 ECH
Pste5g03303 5 26246589 26260146 Pste4g00788 4 6140138 6154340 PCT