Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03266 AAGAAAGTGAGATTTAGATTGGGATGCACAAGGCAAGAGGAACCAAGCAAAACGGATGAGGGTGGCATGCCAATGCCACGTCAGAAATTATTGTATTATATGACATGTGACATGTGACATGTGACATGTGATATGTGGATTCAATGATATGATCATTGTTTGTTTGCAGAGGCAGAGCGAAAGAGAAAGAGAAAGAGGAAGAAAAAGAAGAGGATGGAGAGGGTGTTGTCAGTGGATGAAATATCGGAGCAATATTGGGTGGCAATGGGAGGGTGGTGCAAGTCAAAGTCAAAGTCAAAGATGAACAGGAGCGAATCGGAGTGGGCCTTTCAGCAGTTCCTAAAGGAACAGGAACAGGAGCAGGAACAGGAACAGGAACAGGAACAGGAAGCTTCTTCTTCCTCTAATTCTGATGTTAAACCCATAATGGATCCCAACATCCCTTCCGAGGACTACCATGCTATTCTTAAGACCAAGCTTAATCTTGCCTGCGCCGCTTTTGCTTTCACTCGGGGATCTTTGGTCAAATCTCAAAATCCTGCCATTTTCTCTGATAGTGGATCACAGGCATCACCTTTTGAAGTTGGATTGCAGGCTACCTTAAAAGGATCTGGCCATTTTGGAAATGATCCATCTAAATTACAAAATAAAGATGTCAAAACACCAATTGCGATTCCTTTCTCACCTTCCATGCAAAAGAAACCTGCTGTTGCATTGAGTGGATCATCAAGAGAACAATCTGATGATGAGGAAGCGGAGGAAGAGATTAATATGACTGAAAACATGAACCCTGCTGACGCAAAACGAGTAAGGAGGATGCTATCTAATAGGGAGTCTGCCAGACGCTCAAGAAGAAGAAAGCAAGCTCATTTAACTGAACTCGAGACACAGGTCTCCCAATTACGAGGTGAAAATTCTTCATTGTTAAAGCGATTAACGGATGTAAGCCACAAATACAATGATGCTGCAGTTGACAACAGAGTACTGAAAGCTGCTGTTGAAACTTTAAGAGCAAAGGTGAAGATGGCAGAGGAGACGGTGAAAAGAATTACTGGGTTGAACCCAATGTTTCCTGCCATGACTGAGATATCATCAATGGGAATGCCAGTGTTTGATGAAAGTCCTTCAGAGACATCAGTTGATGCTGCTGTTCCTGTGCAAGAAGACCCAAATCATCACCTTTGTCAACCCGCTTCTAATAATGGGTTGGGAGGCATTTCTTCAATTGAAACTGTGCAGCAGAATGTTGCAGCAGTGGTAGGCGGGAACAAAACGGGGAGTACAACTTCCCTGCGTAGAGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGCAGATTCATCACGTGGACCTCCTTCTAATGGAGAACAATAACATAGTAGCTACATTACGTTGTGCTTTCATGAGGATATTATTCTATAAAACTTGTTTCTGCTAGTAGTAAGTAGAGCAAATTCTAATTGACTTGTTGTAAATCAATTTGACTTATGTGAGTATTATTGAGCATGTTCTGGTGGATAATCCTATTTTTCATTTTTTTTTGTGTGGAACCCTCCAAATCTAAATACAATAATACATGGCTGATGTGTAAGCTATAGATTAGTTAGATAGATATGATGGGGACATAGGAGTGTTGATAGAGTTAGCCATATCCAAATTGGATATTGTTTGCTTAATTTAGTTTAGTTGTCGTCATGCTTAGTGGCAGTATCCAAATTGGTGTCTAACCTG 1740 0.4155 MERVLSVDEISEQYWVAMGGWCKSKSKSKMNRSESEWAFQQFLKEQEQEQEQEQEQEQEASSSSNSDVKPIMDPNIPSEDYHAILKTKLNLACAAFAFTRGSLVKSQNPAIFSDSGSQASPFEVGLQATLKGSGHFGNDPSKLQNKDVKTPIAIPFSPSMQKKPAVALSGSSREQSDDEEAEEEINMTENMNPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVSHKYNDAAVDNRVLKAAVETLRAKVKMAEETVKRITGLNPMFPAMTEISSMGMPVFDESPSETSVDAAVPVQEDPNHHLCQPASNNGLGGISSIETVQQNVAAVVGGNKTGSTTSLRRVASLEHLQKRIRGGADSSRGPPSNGEQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03266 389 SUPERFAMILY Leucine zipper domain 197 247 IPR046347 GO:0003700|GO:0006355
Pste5g03266 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 249 IPR004827 GO:0003700|GO:0006355
Pste5g03266 389 Coils Coil 39 63 - -
Pste5g03266 389 PANTHER BASIC LEUCINE ZIPPER 63 1 377 - -
Pste5g03266 389 Gene3D - 196 250 - -
Pste5g03266 389 MobiDBLite consensus disorder prediction 57 71 - -
Pste5g03266 389 MobiDBLite consensus disorder prediction 154 185 - -
Pste5g03266 389 Coils Coil 255 275 - -
Pste5g03266 389 CDD bZIP_plant_GBF1 198 249 IPR045314 GO:0003700|GO:0006355
Pste5g03266 389 Coils Coil 206 240 - -
Pste5g03266 389 Pfam Basic leucine-zipper C terminal 264 377 IPR020983 -
Pste5g03266 389 Pfam bZIP transcription factor 196 247 IPR004827 GO:0003700|GO:0006355
Pste5g03266 389 FunFam BZIP transcription factor 195 246 - -
Pste5g03266 389 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Pste5g03266 389 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Pste5g03266 389 MobiDBLite consensus disorder prediction 38 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03266 Pste-Chr5 25905019 25909287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03266 1 286 bZIP Transcription Factor Family AT4G02640 36.474 5.48e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g03266 bZIP_C 6.6e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03266 5 25905019 25909287 Pste5g03266 5 25905019 25909287 ECH
Pste5g03266 5 25905019 25909287 Pste4g00838 4 6480824 6483637 PCT