Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03234 ATGGCTTCTCAGCAACACGACGCCGTCTTCCGCGAAGAAGACATCGACGACGACTACGACGAGTCCCAGGAGGACGAAGAGTACGAAGAGGACGACGACGTTTTAGCCGACGACGAAGATAGCCACCCCTCTCCTGTCACCGCTCTCGCCGTCACCGTTGCCGTCCCCGGTTCCGCCGTCTCCAACGGAGCCTCCGCCCCAATTTCGACGGCCACCGCCACCACAGTCGTCGTCAGCGACTCCTCCGATCCGAAGCGGCGGCGCGTGGAACAAATCGAGGAGAAAAAGCCTCCGCCGCCGCTGGACGACTCCCGGCGCCTGTTTCAGCGGCTGTGGACCGACGAGGACGAGATCGAGCTCTTGCAAGGTTTCCTGGACTACACCTCGCAGCGAGGATCCTCTCACCACAACGACACTGCGTTGTTCTACGACCAAATCAAGTCAAAGCTCCAACTCGATTTCAACAAGAACCAGCTCGTGGAGAAGATCCGAAGATTAAAGAAGAAGTACCGTAACGTCTTAAACAAGATTGGCTCCGGCAAGGAATTCTCCTTCAAAAGCGCTCACGACCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCAGCGTGGCTCCAATAGGCGACAATTCCTTGGACGACGACGAAATCAACCCCAGTCCCAATCCTAACCCTAGCCCCAACCCTAACCTTAATTTTAGCCCTCTAATTCATAAGAATGAAATGATTGTCAGAAATTCCGCGGAGAAGAAAACACCGAAACGGTCTCGGCCTCGTTCGGCGGTGAAAATCGAATCAATTGATGGATCAGCGTCAAACAGAGATCATAATTGTACAAGCAATGCTACAGCTACAGCTACAGCTACTGCTACTGCTCCACCTAGTGCTACTAACACTACTACTAATAATTGTAACAGTGGTTATGGCAATAACATACCGAGTTTGATTGAGGAGACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAAGGAGTTGGTGGGAGGTGGAGTGTTTGGGGCGAGAGGGTTTTCTACGAACATGAACATGAACATGAACATGAACCCTATGCCTTTGATGAATTTGAGTTTTGGCGGCGGCGAAGTGTTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAAGTGTACTCAAAGCGCTTGGAGCTGGTTCAGGATCACATCAAGGCTGCTATGGAAGAGTTGCGCTCACATGGAGGAGCTTGA 1224 0.5204 MASQQHDAVFREEDIDDDYDESQEDEEYEEDDDVLADDEDSHPSPVTALAVTVAVPGSAVSNGASAPISTATATTVVVSDSSDPKRRRVEQIEEKKPPPPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSSVAPIGDNSLDDDEINPSPNPNPSPNPNLNFSPLIHKNEMIVRNSAEKKTPKRSRPRSAVKIESIDGSASNRDHNCTSNATATATATATAPPSATNTTTNNCNSGYGNNIPSLIEETVRSCLSPVLKELVGGGVFGARGFSTNMNMNMNMNPMPLMNLSFGGGEVLDEKWRKQQILELEVYSKRLELVQDHIKAAMEELRSHGGA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03234 407 MobiDBLite consensus disorder prediction 74 103 - -
Pste5g03234 407 MobiDBLite consensus disorder prediction 13 38 - -
Pste5g03234 407 MobiDBLite consensus disorder prediction 210 279 - -
Pste5g03234 407 Coils Coil 156 176 - -
Pste5g03234 407 Pfam Protein of unknown function, DUF573 108 202 IPR007592 GO:0006355
Pste5g03234 407 Coils Coil 380 400 - -
Pste5g03234 407 PANTHER BNAANNG10740D PROTEIN-RELATED 2 400 IPR007592 GO:0006355
Pste5g03234 407 MobiDBLite consensus disorder prediction 1 46 - -
Pste5g03234 407 MobiDBLite consensus disorder prediction 243 262 - -
Pste5g03234 407 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03234 Pste-Chr5 25510764 25511987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03234 51 403 GeBP Transcription Factor Family AT5G28040 46.883 5.92e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pste5g03234 DUF573 1.6e-34 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03234 5 25510764 25511987 Pste4g00881 4 6890490 6891563 PCT