Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03215 TCTGAAACTTCATTCAATCAAAATTTCCTCATGCTGTTCATATTTTCAATGCTTCTGTCCATGAAGCTCAAACCATTTTGGGTGCTTCTTGTAATGCACTTTGGTGCATTTGCAATGGCATCTGCTGCTAATCATGATGTTGCTTCTTCTGAGATTGAAGCAAATGCTTTGTTGAAGTGGAAAGCCAGTCTTGATAACCATAGTCAAGCTTCTCTCTCTTCATGGTCTGGCAATAATCCTTGCAATTGGTTTGGAATTGCTTGTGATGATGGCTCAAATTCTGTTTCCAACATAACTATTACACGTGTTGGATTAAAAGGTACCCTTCAAAGTTTTAATTTCTCTTTACTTCCAAACATAGTTGGTCTAAATGTTAGTTACAACTTTTTGTATGGAAGTATTCCTCCTCAAATTGAGGCTTTGTCCAATCTCAAGTCTCTTGATTTGTCCTCAAATAAACTCTCTGGTAGAATTCCCAACACCATTGGCCAACTGTCCAAACTATTACATCTTAATTTTAGTTCCAATGGTCTCTCTGATTCTATTCCTAGTGAAGTGGGAAATCTCCATTCTCTTCTCACATTTGATATATATGACAACAACCTTTCTGGGTCTATTCCACCTTCTATAGGTGACATGCTCAATTTGCAATCAATTCACCTTTTCAATAATAAACTCTCTGGACCCATTCCTTCCTCTATTGGAAATTTGTCCAACCTCACTATGTTATCTTTATCATCAAATAAACTCAATGGGTCTATTCCTCCTAGTGTTGGAAATTTACAAAAGGCCAAGGTGATATGTTTTATTGGAAATGAGCTTAGTGGAGAGGTTCCAAAAGAAATGGAGAAGCTTATTGATTTGGAATGTTTGCAGCTGGCTGATAATCATTTTGTTGGCCAGATACCTCAGAATGTTTGCCTTGGTGGAAAGTTGGAATACTTCACTGCAGGAAACAACAGCTTCACAGGCCCAATTCCAGAGAGTTTGAGGAAATGCTACACTCTTAAAAGACTCAGGCTTCAACAAAACTTTCTAACTGGGGATATCACAAATTTTTTTGATGTACTTCCAAACTTGAACTACATTGATTTGAGTGATAATAATTTTCATGGTCAACTTTCACCTCAATGGGGAAGGTTTCGTAGCCTCACAAGCCTCATGATCTCTGAGAATAATTTAACAGGTGTTATCCCACCAGAGCTAGGTGGAGCTTCCAAGTTACAAATACTTCACCTATTCTCAAACCATCTTACAGGAAACATTCCTCAAGAATTGTTTCACTTGACCTCCTTGTTTGATCTTTTAATCAACAACAATAATCTCTCAGGAAATCTTCCTATTCAAATATCATCACTACAACAACTTAAATATTTGGAGATTGGTTCAAATGATTTCACTGGCTTAATCCCAAACCAACTTGGTGATTTGCCCAGTTTATTGATATTGAATCTGGGCCGTAATAAATTTGAGGGAAGTATTCCTTCAGAGCTTGGGAGTCTGGAATATCTTTCAAGTCTTGATCTTAGTGGAAATTTGTTGAGTGGAACAATACCATCAACACTTGGAGGAATGAAAGGCTTAGAAAAAATAAATCTCTCACACAATGATCTTTCCGGTGGTCTCTCTAGCTTTGATGACATGGTAAGCTTGACATCTTTTGATATATCATACAACCAGTTAGAGGGTCCACTTCCAGACATTCAAGCCTTCCAAAATGCTACAATTGAATCATTGAGAAATAATAAAGGCTTATGTGGCAAAATCAATGGCTTGGAGCCATGCCCAACATTAAGAGGGAAATCTCATAATCATATGACAAGGAAAATCCTAGTAGCAGTTCTACCCCTTACTTTGGCCATTCTAATGCTTGCATCATTTGTTTTTGGAGTTTGGTATTACTTACGCCAAACTTCAAAGAAAGAACAAGATCGGTCTACAAGTTTACTACGATCTCAGGGCATATTTCCAACTTGGAATTTTGGTGGCAAATTCATGTTTGAGAATATTGTAGAAGCCACAGAATATTTTGACGACAAATATCTCATTGGGGTTGGAGGGCAAGGTTCTGTCTACAAAGCAATGTTGCCTACAGGTGAAGTTGTTGCTGTGAAGAAACTTCATTCAGTTCCAAATGGAGAAATGCTCAATTTGAAAGCTTTTGAAAGTGAGATCCATGCTTTGACAGAAATTCGACACCGTAATATTGTAAAGTTACATGGATTTTGTTCACATTCACAATACTCATTTTTGGTGTGTGAATTCCTAGAGAAAGGTGATCTTAAGAAGATTTTGAAGGATGATGAACAAGCAATTGCGTTTGATTGGAGTAAGAGGGTGAATGTTGTTAAAGATGTAGCAAATGCTTTATGCTACATGCACCATGATTGCTCACCTCCAATTGTTCATCGTGATGTATCAAGCAAGAATGTTCTTTTGGATTCTGATCATGTAGCTCATGTCTCAGACTTTGAACTTGCATACACAATGGAGGTAAATGAGAAATGTGATGTGTATAGTTTTGGGGTCTTAGCATTGGAAATATTATTTGGAAAGCACCCTGGTGATGTTACATCTTCATCAATTGGTGTAGCCTCAAAACTTGATCATGTGACATTGATGGATAGGTTGGATGAACGTCTTCCTTGTCCAACAAGCCCTATTGTTGTTGAGGTGGTATCAATTTTAAAGATAGTAATTTCTTGCTTGATTGAGAGTCCAAGATCTCGCCCTACCATGGAGTATGTTGCTAAAGAGCTTGCAATGTCAAAGTCATCGATCTTCAATGCCACAAAAACTTAA 2802 0.3747 SETSFNQNFLMLFIFSMLLSMKLKPFWVLLVMHFGAFAMASAANHDVASSEIEANALLKWKASLDNHSQASLSSWSGNNPCNWFGIACDDGSNSVSNITITRVGLKGTLQSFNFSLLPNIVGLNVSYNFLYGSIPPQIEALSNLKSLDLSSNKLSGRIPNTIGQLSKLLHLNFSSNGLSDSIPSEVGNLHSLLTFDIYDNNLSGSIPPSIGDMLNLQSIHLFNNKLSGPIPSSIGNLSNLTMLSLSSNKLNGSIPPSVGNLQKAKVICFIGNELSGEVPKEMEKLIDLECLQLADNHFVGQIPQNVCLGGKLEYFTAGNNSFTGPIPESLRKCYTLKRLRLQQNFLTGDITNFFDVLPNLNYIDLSDNNFHGQLSPQWGRFRSLTSLMISENNLTGVIPPELGGASKLQILHLFSNHLTGNIPQELFHLTSLFDLLINNNNLSGNLPIQISSLQQLKYLEIGSNDFTGLIPNQLGDLPSLLILNLGRNKFEGSIPSELGSLEYLSSLDLSGNLLSGTIPSTLGGMKGLEKINLSHNDLSGGLSSFDDMVSLTSFDISYNQLEGPLPDIQAFQNATIESLRNNKGLCGKINGLEPCPTLRGKSHNHMTRKILVAVLPLTLAILMLASFVFGVWYYLRQTSKKEQDRSTSLLRSQGIFPTWNFGGKFMFENIVEATEYFDDKYLIGVGGQGSVYKAMLPTGEVVAVKKLHSVPNGEMLNLKAFESEIHALTEIRHRNIVKLHGFCSHSQYSFLVCEFLEKGDLKKILKDDEQAIAFDWSKRVNVVKDVANALCYMHHDCSPPIVHRDVSSKNVLLDSDHVAHVSDFELAYTMEVNEKCDVYSFGVLALEILFGKHPGDVTSSSIGVASKLDHVTLMDRLDERLPCPTSPIVVEVVSILKIVISCLIESPRSRPTMEYVAKELAMSKSSIFNATKT 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03215 933 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515
Pste5g03215 933 FunFam Uncharacterized protein 307 604 - -
Pste5g03215 933 FunFam MDIS1-interacting receptor like kinase 2 isoform A 207 306 - -
Pste5g03215 933 ProSiteProfiles Protein kinase domain profile. 677 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03215 933 PRINTS Leucine-rich repeat signature 144 157 - -
Pste5g03215 933 PRINTS Leucine-rich repeat signature 237 250 - -
Pste5g03215 933 PANTHER LEUCINE RICH REPEAT KINASE 2 234 925 - -
Pste5g03215 933 ProSiteProfiles Leucine-rich repeat profile. 143 165 IPR001611 GO:0005515
Pste5g03215 933 Gene3D Ribonuclease Inhibitor 472 595 IPR032675 -
Pste5g03215 933 Gene3D Phosphorylase Kinase; domain 1 636 755 - -
Pste5g03215 933 Gene3D Ribonuclease Inhibitor 202 307 IPR032675 -
Pste5g03215 933 SUPERFAMILY L domain-like 302 576 - -
Pste5g03215 933 Gene3D Ribonuclease Inhibitor 373 471 IPR032675 -
Pste5g03215 933 Gene3D Ribonuclease Inhibitor 308 372 IPR032675 -
Pste5g03215 933 SUPERFAMILY L domain-like 56 374 - -
Pste5g03215 933 SUPERFAMILY Protein kinase-like (PK-like) 654 920 IPR011009 -
Pste5g03215 933 Pfam Leucine rich repeat 504 561 IPR001611 GO:0005515
Pste5g03215 933 ProSitePatterns Tyrosine protein kinases specific active-site signature. 801 813 IPR008266 GO:0004672|GO:0006468
Pste5g03215 933 Gene3D Ribonuclease Inhibitor 49 201 IPR032675 -
Pste5g03215 933 FunFam Leucine-rich repeat receptor protein kinase MSP1 638 755 - -
Pste5g03215 933 SMART LRR_typ_2 381 405 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 548 573 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 141 165 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 285 309 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 189 213 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 237 261 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 453 476 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 406 429 IPR003591 -
Pste5g03215 933 SMART LRR_typ_2 477 501 IPR003591 -
Pste5g03215 933 Pfam Leucine rich repeat N-terminal domain 53 89 IPR013210 -
Pste5g03215 933 FunFam Nuclear pore complex protein NUP107 50 206 - -
Pste5g03215 933 Pfam Protein kinase domain 679 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03215 933 Gene3D Transferase(Phosphotransferase) domain 1 756 829 - -
Pste5g03215 933 Gene3D Transferase(Phosphotransferase) domain 1 830 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03215 Pste-Chr5 25298321 25301491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03215 15 850 Receptor kinase-like Gene Family AT4G08850 39.158 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g03215 Pkinase 3.4e-28 CL0016