Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03213 ATGGTGTTCATATTTCCTAAGCTTCTGTCCATGAAGCTTCAACCATTTTGGGTGGTTGTTATAACGTGCTTTTGTGCATTTACAATAGCTTTTTCTTCTTCTGAGATTGAAGCAAATGCTTTGTTGAAGTGGAAAGCTAGTCTTGATGACCATAGTCAAGCTTCTCTCTCTTCATGGTCTGGCAATAATCCTTGCAATTGGTTTGGAATTGCTTGTGATGATGGCTCCAATTCTGTTACCAACATAACTCTTATACGTGTTCGATTAAGAGGTACGCTTCAAAGTTTCAACTTTTCATTACTTCCAAACATTGTTGGTCTAAATGTAAGTTACAATTACTTGTCTGGAAGTATTCCTCCTCAAATTGAGGCTTTGTCCGATCTCAAGTCTCTTGATCTTTCCTCTAATAATCTCTCTGGTAGTATTCCCAATACCATTGGTAATTTGTCCAAACTATTATATCTTAATTTTAGTTCCAATGGTCTCTCTGGTGCTATTCCTAGTGAAGTGGGAAATCTCCATTCTCTTCTCACATTTGATATATATGACAACCACCTTTCTGGGTCAATCCCATCTTCCATTGGAAACATGCTTAATTTGGAGTCCATTCATCTTTTTAATAATCAACTCTCTGGGCCTATTCCTTCCTCTATTGGAAATTTGTCCAACCTCACTATGTTATCTTTATCATCAAATAAACTCAATGGGTCTATTCCTCGTAGTGTTGGAAATTTACAAAAGGCCAAGGTGATATGTTTTATTGGAAATGAGCTAAGTGGAGAGGTTCCAAAAGAAATGGAGAAGCTTATTGATTTGGAATGTTTGCAGCTGGCTGATAATCATTTTGTTGGCCAGATTCCTCAGAATGTTTGCCTTGGTGGAAACTTGAAATACTTCACAGCTGGTAATAATAGTTTCACAGGTCCAATTCCAGAGACTTTGAGGAAATGCTACAGTCTTAAAAGACTCAGACTTCAGCAAAACTTTCTAACTGGGGATATCACAAATTTTTTTGATGTACTTCCAAACTTGAACTACATAGATTTGAGTGATAATAATTTTCATGGTCAAATTTCACCTCAATGGGGAAGGTTTCGTAGCCTCACAAGCCTCATGATCTCTGAGAATAATTTAACAGGTGTTATCCCACCTGAACTAGGTGGAGCTTCCAAGTTACAAATACTTCACCTATCTTCAAACCATCTTACAGGAACTATTCCTCAAGAATTGTTTCAGTTGACCTCCTTGTTTGATCTTTTAATCAGCAACAATAATCTCTCAGGAAATTTTCCCATACAAATATCATCACTACAGCAACTTAAATATTTGGAGATTGGTTCAAATGATTTCACTGGCTTAATCCCAAACCAAGTTGGAGATTTGCCTAATTTATTGATCCTTGATCTGAGCCAGAATAAATTTGAGGGAAATATTCCTTCAGAGCTTGGTGGTTTGAAATACCTTACAAATCTTGATCTCAGTGGGAATTTGTTGACTGGAGTAATACCACCAACTCTTGGAGGAATAAAAGGCTTAGAAACATTGAATCTCTCACACAATAGCCTTTCAGGTGATCTATCTAGCTTTGATGAAATCATAAGCTTGACATCTTTTGATGTATCATATAACCAGTTAGAGGGTCCACTTCCAGACACTCCAGCCTTCCAGAATGCTACAATTAAATCATTGAGAAATAATAAAGGCTTATGTGGCAATGTTAATGGCTTGGAGCCTTGCTTAACTTTAAGTAGGGAATCTAATAATCATAGGGCAAGGAAAGTCCTACTGGCAGTTTTACCCCTTACTTTGGCCATTCTAATGCTTGCATCATTTGTTTTTGGAGTATGGTATTACTTACGCCGAACTTCAAAGAAAGAACAAGAGCAGGCTACTAGTTTACTAAGATCTCCAAGCATATTCCCAACTTGGAGTTTTGGTGGCAAATTCATGTTTGAGAATATTATTGAAGCAACTGAATATTTTGATGACAAATATCTCATTGGGGTTGGAGGACAAGGATCTGTTTACAAAGCAATGTTGCCTACAGGTGAAGTTGTAGCCGTGAAGAAACTCCATTCAGTTCCAAATGGTGAAATGCTCAATCCCAAAGCTTTTGAAACTGAGATCGAAGCTTTGACAGAAATCAGACACCGTAACATTGTAAAGTTACATGGGTTTTGTTCACATTCACAATACTCATTTTTGGTGTGTGAATTCCTAGAGAAAGGAGATCTTAAGAAGATTTTGAAGGATGATGAAGAAGCAATTGCATTTGATTGGAATAAGAGGGTGAATGTTGTTAAAGATGTAGCAAATGCTCTATGCTATATGCACCATGATTGCTCACCTCCAATTGTTCATCGTGATGTATCAAGCAAGAATGTTCTTTTGGATTCTGATCATGTAGCTCATGTCTCAGACTTTGGTACAGCAAAGTTTCTTAATCCTAATGCATCTAATTGGACCTCATTTGTAGGGACATTTGGATATGCTGCTCCAGAACTTGCATATACAATGGAGGTAAATGAGAAATGTGATGTGTATAGTTTTGGAGTCTTAGCATTGGAAATATTGTTTGGAAAGCACCCTGGTGATGTTACATCTTCATCAATTGGTGTGGCCTCAACATTTGATTATATGACATTGATGGATAAGTTAGATGAACGTCTTCCTCATCCAACAAGCCCTATTGTTTTTGAGGTGGTATCAATTTTGAAGATAGCATTTGCTTGTTTGACTGAAAGTCCACGATTTCGCCCTACCATGGAGCATGTTGCTAAGGAGCTTGCAATGTCGAGGTCATCTTCAATGCCACATACACTCATAGAGCTCAAAGATTGA 2841 0.3745 MVFIFPKLLSMKLQPFWVVVITCFCAFTIAFSSSEIEANALLKWKASLDDHSQASLSSWSGNNPCNWFGIACDDGSNSVTNITLIRVRLRGTLQSFNFSLLPNIVGLNVSYNYLSGSIPPQIEALSDLKSLDLSSNNLSGSIPNTIGNLSKLLYLNFSSNGLSGAIPSEVGNLHSLLTFDIYDNHLSGSIPSSIGNMLNLESIHLFNNQLSGPIPSSIGNLSNLTMLSLSSNKLNGSIPRSVGNLQKAKVICFIGNELSGEVPKEMEKLIDLECLQLADNHFVGQIPQNVCLGGNLKYFTAGNNSFTGPIPETLRKCYSLKRLRLQQNFLTGDITNFFDVLPNLNYIDLSDNNFHGQISPQWGRFRSLTSLMISENNLTGVIPPELGGASKLQILHLSSNHLTGTIPQELFQLTSLFDLLISNNNLSGNFPIQISSLQQLKYLEIGSNDFTGLIPNQVGDLPNLLILDLSQNKFEGNIPSELGGLKYLTNLDLSGNLLTGVIPPTLGGIKGLETLNLSHNSLSGDLSSFDEIISLTSFDVSYNQLEGPLPDTPAFQNATIKSLRNNKGLCGNVNGLEPCLTLSRESNNHRARKVLLAVLPLTLAILMLASFVFGVWYYLRRTSKKEQEQATSLLRSPSIFPTWSFGGKFMFENIIEATEYFDDKYLIGVGGQGSVYKAMLPTGEVVAVKKLHSVPNGEMLNPKAFETEIEALTEIRHRNIVKLHGFCSHSQYSFLVCEFLEKGDLKKILKDDEEAIAFDWNKRVNVVKDVANALCYMHHDCSPPIVHRDVSSKNVLLDSDHVAHVSDFGTAKFLNPNASNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLALEILFGKHPGDVTSSSIGVASTFDYMTLMDKLDERLPHPTSPIVFEVVSILKIAFACLTESPRFRPTMEHVAKELAMSRSSSMPHTLIELKD 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03213 946 Gene3D Ribonuclease Inhibitor 186 250 IPR032675 -
Pste5g03213 946 ProSiteProfiles Leucine-rich repeat profile. 127 149 IPR001611 GO:0005515
Pste5g03213 946 FunFam Uncharacterized protein 291 588 - -
Pste5g03213 946 ProSiteProfiles Protein kinase domain profile. 661 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03213 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 785 797 IPR008266 GO:0004672|GO:0006468
Pste5g03213 946 FunFam MDIS1-interacting receptor like kinase 2 isoform A 191 290 - -
Pste5g03213 946 Pfam Leucine Rich Repeat 128 149 IPR001611 GO:0005515
Pste5g03213 946 Gene3D Transferase(Phosphotransferase) domain 1 740 941 - -
Pste5g03213 946 SMART LRR_sd22_2 485 514 - -
Pste5g03213 946 SMART LRR_sd22_2 221 247 - -
Pste5g03213 946 SMART LRR_sd22_2 125 151 - -
Pste5g03213 946 SUPERFAMILY L domain-like 63 383 - -
Pste5g03213 946 Pfam Leucine rich repeat 487 545 IPR001611 GO:0005515
Pste5g03213 946 Pfam Leucine rich repeat 366 426 IPR001611 GO:0005515
Pste5g03213 946 Gene3D Ribonuclease Inhibitor 251 580 IPR032675 -
Pste5g03213 946 SMART LRR_typ_2 390 413 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 461 485 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 365 389 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 125 148 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 221 245 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 149 173 IPR003591 -
Pste5g03213 946 SMART LRR_typ_2 269 293 IPR003591 -
Pste5g03213 946 FunFam MDIS1-interacting receptor like kinase 2 740 935 - -
Pste5g03213 946 Gene3D Ribonuclease Inhibitor 33 185 IPR032675 -
Pste5g03213 946 Gene3D Phosphorylase Kinase; domain 1 619 739 - -
Pste5g03213 946 SUPERFAMILY Protein kinase-like (PK-like) 635 929 IPR011009 -
Pste5g03213 946 PANTHER LEUCINE RICH REPEAT KINASE 2 218 935 - -
Pste5g03213 946 FunFam Leucine-rich repeat receptor protein kinase MSP1 622 739 - -
Pste5g03213 946 FunFam Nuclear pore complex protein NUP107 34 190 - -
Pste5g03213 946 Pfam Protein kinase domain 663 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03213 946 SUPERFAMILY L domain-like 291 562 - -
Pste5g03213 946 PRINTS Leucine-rich repeat signature 221 234 - -
Pste5g03213 946 PRINTS Leucine-rich repeat signature 128 141 - -
Pste5g03213 946 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03213 Pste-Chr5 25242009 25245006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03213 79 833 Receptor kinase-like Gene Family AT4G08850 43.963 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste5g03213 Pkinase 2.1e-46 CL0016