Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03199 ATGTCTCCCTTTAAAATAAAAAATAAAATGGGAGCACAGAAGAAAAGCGGCGCTAGGGTTTCAGAGGAGGCGGACGAACTGGTGCGGGTTCCGCTGCAGGCAATTCTCTTGGCCGATAGTTTCACGACCAAGTTCAGACCTATCACCCTGGAACGCCCCAAAGTGCTGCTGCCGCTGGTGAATGTTCCGATGATCAATTACACCCTCACTTGGCTGGAATCCGCTGGCGTCGAAGAGGTTTTCGTTTTCTGCTGCTCTCATTCCAAACAGGTCATTAACTACCTCCACAATTCTGACTGGCTCTCTCAACCCAATTTCACGGTATCCACTATCGAGTCTCAGAACTCTGTCAGCGCCGGCGACGCCCTTCGCGTAGTCTACGAGCGCAATGTGATACATGGAGACTTTGTCCTTATCAGTGGAGATACTGTTAGCAATATGTCGCTTACTCAGGCACTTCTAGAGCATAAAGAAAGAAAGAAGAAAGATAGTAATGCTGTAATGACTATTTTCATTAAACGGTCGAAACCTAATCCAGCTATCCATCAGTCTCGACTTGGTACGGATGAACTTTTTATGGCCATTGATCCTAATACCAAGCAACTTCTTTATTATGAGGATAGGGCAGACCAATCAAAAGGAACACTACATCTTGACAAGTCATTACTTGTTGATAATCCTTCGCTCTCTCTACATCATGATAAGCAGGATTGTTACATTGACATCTGCTCACCAGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTACGGCGCCATTTTGTCAAAGGATTGCTTCTTGATGATATAATGGGGTACAAAATTTTTGTTCATGAAATCCACTCAGACTATGCTGCAAGGATTGATAATTTCCGAAGTTATGACACTGTCAGCAAGGATATAATTCACCGGTGGACATATCCATTGGTGCCAGATGTAATGAATTTTGGCAACTCAGTTACTAAACTTGAACGACAAGGAATATACCGTGCTTCAGAAATATCACAATCACAGTCGGCTGTTATTGGTCCTTGCACTGTCATAGGATCTGGCACCAAAATTGGGAATAACACTAAAATTTCAAATTCTGTTATTGGTGAAGGATGTAAAATTGGATCAAATGTTATCATAGAGGGTTGCTATATATGGGATAACATCAGCATAGAAGATGGCTGTAAACTCCAGCATGCAATTGTATGTGATGGGGTGATAATAAAGTCAGGGGCTGTTCTGGAACCTGGTGTTATTTTGTCTTTTAAGCTTTTGATGCATCCAGCAATTTTATGCTTCCAGGTTGTAGTTGGGCCAGAGTTTGTTGTTCCTCCATATTCAAAAGTATCTCTATTTCAGCAGCCAATTGAGGAAGACAGTGATGAGGAGCTTGAGTATGCTGATAGTACTAGTGTCATAGGTAGCCAAATGGAAAAATCAGATGTAGAGATTGCTTCCCAAGTTTTGGAGACACATTTTAGTCCTGCTTCGGAGCTAGGTATGGGTGGGGCTGGTCATGTTTGGTTAACGTGTGAAGGTGGCCATGAAGAAGAGTGGAGGCATTCAGTGGCACCTATTCCTAAAGATAAAATTCTGGAGGCAATTAAAATTATGGAAGATGATCTGGAGTTAACTCATGATGACAGTTTTTTCCCACCTTCTGGAGAGCTGAAACCTAATTCTAATGATTCAGATGATGATGATCATGAAGATTCTAGAGATGACTCTTATTACTTTGAGAAAGAGGTTGAAGCAACGTTTCTCAGGGCTGTGCATGAAAACATACAAGAAAGCCATTTGATCTTGGAAATCAATTCTTTGAAGTTGTCATACAATAAGCTAACTGCTGATTGTGCTGGAGCAGTATTTTATGCTATGATGAAGTATGCTTTAGACACCCCCCATAGTTCAGCTGATAGCTTGCTTCAAAATGTTCAGGTTGTATTTACAAAATGGAAAAAGGTTCTTACATCCTATCTGACTGACATAGATGAACAGATTGAAATAATACTAAAATTTGAAGAAATGTGTTCGGAATCTGCTAAGGAGTATGCTACTTTGTTCACAAGGATTTTGCACTACTTTTACAATGAAGATGTTGTAGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAAAAGGACGCTGATGAGGCTGATAAAGTTTTTGTTAAGCAGGCCCAACATTTAATTCAATGGCTAAAAGAGGCCTCTGAAGAAGACGATGATGACCAGGAATAGAATGGGTTTTTCAAGGTGCTGTCATCTCAGCAGCTTAAAAGGACCTTCAGTGCTTGCATTTATCCTGTAATTCTTCAAATGGGTAGTTATTTTGTCTTGTTCCTCTGCATATGATGTGGAGGAATTAAGCTAAGGAAAATTTGAAAGCGTTGGAAGCACGTATCCCTCGGAGTTTCAAGTTTGTTACATCGTGTGATCACTAATTACCTGTTAATTTTGCTCACTCAGCAGGTTAAGTGGTGAAAGTTTCTAAAATTAGTACTTTGATTTCTTGATTAGTGTTGTATTCTGGCTATTGAAATACTTAGGTGAACTATAATAATTATTATTAGGGTTAAATGTAAAATAACAATTCCAATTGTGGGTCATGTATGAATATTTAATGATGCTATATGGTCTTACTAAAAAAGCTCATACAACTAGGTAAAC 2670 0.3966 MSPFKIKNKMGAQKKSGARVSEEADELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLHNSDWLSQPNFTVSTIESQNSVSAGDALRVVYERNVIHGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTIFIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLLYYEDRADQSKGTLHLDKSLLVDNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNSVTKLERQGIYRASEISQSQSAVIGPCTVIGSGTKIGNNTKISNSVIGEGCKIGSNVIIEGCYIWDNISIEDGCKLQHAIVCDGVIIKSGAVLEPGVILSFKLLMHPAILCFQVVVGPEFVVPPYSKVSLFQQPIEEDSDEELEYADSTSVIGSQMEKSDVEIASQVLETHFSPASELGMGGAGHVWLTCEGGHEEEWRHSVAPIPKDKILEAIKIMEDDLELTHDDSFFPPSGELKPNSNDSDDDDHEDSRDDSYYFEKEVEATFLRAVHENIQESHLILEINSLKLSYNKLTADCAGAVFYAMMKYALDTPHSSADSLLQNVQVVFTKWKKVLTSYLTDIDEQIEIILKFEEMCSESAKEYATLFTRILHYFYNEDVVEEDAILSWEDEKKDADEADKVFVKQAQHLIQWLKEASEEDDDDQE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03199 746 FunFam Trimeric LpxA-like enzyme 325 469 - -
Pste5g03199 746 CDD LbH_eIF2B_epsilon 350 439 - -
Pste5g03199 746 Gene3D - 566 744 - -
Pste5g03199 746 MobiDBLite consensus disorder prediction 548 574 - -
Pste5g03199 746 Pfam eIF4-gamma/eIF5/eIF2-epsilon 665 744 IPR003307 GO:0005515
Pste5g03199 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 29 378 IPR029044 -
Pste5g03199 746 FunFam Translation initiation factor eIF-2B subunit epsilon 21 312 - -
Pste5g03199 746 CDD eIF-2B_epsilon_N 32 248 IPR035543 -
Pste5g03199 746 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 18 745 - -
Pste5g03199 746 Pfam Bacterial transferase hexapeptide (six repeats) 349 382 IPR001451 -
Pste5g03199 746 Gene3D Hexapeptide repeat proteins 316 488 - -
Pste5g03199 746 SUPERFAMILY Trimeric LpxA-like enzymes 275 420 IPR011004 -
Pste5g03199 746 SUPERFAMILY ARM repeat 579 737 IPR016024 -
Pste5g03199 746 ProSiteProfiles W2 domain profile. 573 744 IPR003307 GO:0005515
Pste5g03199 746 SMART 542_3 653 740 IPR003307 GO:0005515
Pste5g03199 746 CDD W2_eIF2B_epsilon 579 742 IPR044123 GO:0005085|GO:0031369
Pste5g03199 746 Pfam Nucleotidyl transferase 34 175 IPR005835 GO:0009058
Pste5g03199 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 312 IPR029044 -
Pste5g03199 746 FunFam Translation initiation factor eIF-2B epsilon subunit 569 745 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03199 10 738 Eukaryotic Initiation Factors Gene Family AT2G34970 63.179 0.0 929