Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03177 TCCAGGAGAAAGGTTAGAGAGCCAAAGGAGGAAAACGTGACTCTGGGTCCAGCTGTTAGAGACGGAGAACATGTCTTCGGTGTCGCTCGCATCTTTGCTTCCTTCAATGACACCTTCATTCATGTCACTGATTTGTCTGGGAGAGAAACACTTGTCCGCATCACTGGTGGAATGAAAGTTAAAGCTGACAGAGATGAATCATCTCCATATGCTGCTATGCTGGCTGCGCAGGATGTTGCTGCCCGATGCAAGGAACTGGGCATAACTGCTCTTCATATCAAGCTTCGTGCCACCGGTGGAAACAAGACAAAGACACCTGGTCCTGGCGCTCAATCAGCTCTTAGAGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGCATAGAGGATGTGACTCCCATTCCTTCGGATAGCACTCGTAGAAAGAGTGGTAGAAGGGACAGAATTGTGGCATTTAAAGTTTTGCTTAAGCTAAATATCAGAACTTGTATTTTATTCTTGAGCTTCTCACTTGAAAATCTATTCCTTAGAGTGGAAATAAAA 540 0.4537 SRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRDRIVAFKVLLKLNIRTCILFLSFSLENLFLRVEIK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03177 180 Hamap 30S ribosomal protein S11 [rpsK]. 2 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste5g03177 180 ProSitePatterns Ribosomal protein S11 signature. 114 136 IPR018102 -
Pste5g03177 180 Gene3D Ribosomal protein S11 1 149 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pste5g03177 180 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 3 143 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste5g03177 180 FunFam 40S ribosomal protein S14 1 149 - -
Pste5g03177 180 Pfam Ribosomal protein S11 27 145 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste5g03177 180 SUPERFAMILY Translational machinery components 23 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03177 Pste-Chr5 24876804 24878984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03177 1 138 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.580 2.16e-91 261