Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03130 CCTTTGTATAGTTCAGTTGTGTGGTAGCAGACGCAACGTCTCTCGCACTCGCATCGCTCTTTACACTCTCACACAGAACACGCGCGAGAGAGATCACAAATGCAAGACATATTCGGATCAGTTCGCCGATCACTGGTATTCCGCGGTTCGCCGGAGAACGAAGAAACCTCTATCGGAGTCGGAGGAAGCCTCGTCGATAAGATCAGTTATTGTATCCGAAGTTCCAGAGTCTTCTCCAAACCCTCACCGCCATCGCCCTCCGTTCCTAAGGACTCTGCTCCTCCGATCCGATGGCGGAAAGGCGAGTTGATCGGTTGCGGCGCCTTTGGCCAAGTCTACGTTGGAATGAATCTCGATTCCGGAGAACTTCTAGCCGTTAAACAGGTTTTGATCGCGGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACATAAAAGAGCTTGAGGAAGAAGTTAAATTACTGAAAGACCTTTCACATCCGAACATTGTTAGATATTTGGGTACGGTCAGAGAAGAGGACACCCTAAATATTCTCCTGGAGTTTGTTCCAGGTGGATCTATATCATCGCTTTTGGGGAAGTTTGGGGCTTTCCCTGAGGCTGTAATAAGAACTTACACGAAGCAGCTTCTACTTGGACTTGAGTATTTGCACAAAAATGGAATCATGCACAGAGACATTAAGGGAGCCAATATTCTTGTAGATAATAAAGGATGCATAAAACTGGCAGACTTTGGGGCTTCTAAACAGGTCGTTGAGCTGGCAACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCAGAAGTTATTCTCCAGACTGGGCATAGTTTCTCTGCTGACATATGGAGTGTGGGTTGTACTGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCAATCCCTGATCATCTCTCAGTTGCAGCAAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCAGTTTTGAGGTCATCCGCATCAGAACTGCTGCAGCATCCCTTTGTTACTGGTGAACAAATGAATTCTCTTCCTCTGACATCTGATGTCACGGAAAATTTGGAAGCTTCATCACCATCATGTGTCACAAATGCTGAATCCTTCCTTTGCTGCTCAACAGTAAATCCTCTGGACTCTGGAAATAAGCAGTCATGGGGAATGAGCAATGATGATGATATGTGTGTGATTGATGATAAAGAAGAGTTCTCGCATAGTGATGTCAAATACAAATCATTGATGTCAACTAATATTGAGAGTTTCAACCCGATGTCTGATCCCTCTGATGATTGGGGATGTAAATTTGATGCAAGTCCCGAACTAGAAAATAGTGGGGTTAATTTTGGCACTGACGAAACTTACATGCCACCAGATCAGTTGGGGCCTGATAAGGCGCAGAATGATTTTTCTTTTCCAGGTGTGCCATCTCTGTCAGAGGAAGATGATGAACTGACAGAGTCAAAAATTAAAGCCTTTTTGGATGAGAAGGCTCTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTACAACAGTTTAAATACATCTTGTTCACCCAATGTGATTGATAGTACAAGTGATGATTTTGCTTCTCGAAAATATTTGAAATTACCTCCTAAAAGCAGGTCGCCAAGCCGGGTACCAATTAGCACTCCATCTAAAGCAGTTGATAATTCTGGAAGTCCTGGAAGTAATGGCCGGTCCTCCACAGCTGTTGGCCATGTAAATAACCATAATAGCTCACAGGATATTCCAGCATCTCCCCTCAATGAATGGAATGGACTGATAGTTGACTCTCAGAAGCAGCCCAGTAGCCCAAGTCTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAGCGAGAAATGATGCGGCAAGCTGGGATGGGCGGAAAGACATCTTCACCAAAGGATCGAGCTTTACATCGGCAGAGGGAGCGGACAAGATTTGCTTCTCCCAGCAAATAAGAGAGACTCGTTAATTACTGGGATTGCAAACACGTTACTTCAGTTTTGTCGTGGTCGTTAATGTTATATATCCATCTTGTCCGTGTTGTTGTGCCATGTAAAGCTTTTTATACATCTGTTGCTTGAAATTTTGTTACTTTCCATTGGGGTTTTTTGAGAGATGCATGGCCGTCAACTTTATGCCCTTTCTGTATTATGAAAATAGAAATAATCAGAACTATGTGGCGCAAGATTGCCTATAAATCTGTTGTCAATTCTCTCTCCTTTTCCC 2287 0.4399 MQDIFGSVRRSLVFRGSPENEETSIGVGGSLVDKISYCIRSSRVFSKPSPPSPSVPKDSAPPIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVAALFHIGTTKSHPPIPDHLSVAAKDFLLKCLQKEPVLRSSASELLQHPFVTGEQMNSLPLTSDVTENLEASSPSCVTNAESFLCCSTVNPLDSGNKQSWGMSNDDDMCVIDDKEEFSHSDVKYKSLMSTNIESFNPMSDPSDDWGCKFDASPELENSGVNFGTDETYMPPDQLGPDKAQNDFSFPGVPSLSEEDDELTESKIKAFLDEKALELKKLQTPLYEEFYNSLNTSCSPNVIDSTSDDFASRKYLKLPPKSRSPSRVPISTPSKAVDNSGSPGSNGRSSTAVGHVNNHNSSQDIPASPLNEWNGLIVDSQKQPSSPSLSFSERQRKWKEELDQELERKREMMRQAGMGGKTSSPKDRALHRQRERTRFASPSK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03130 638 FunFam Serine/threonine-protein kinase STE11 61 155 - -
Pste5g03130 638 MobiDBLite consensus disorder prediction 619 638 - -
Pste5g03130 638 FunFam Mitogen-activated protein kinase kinase kinase 2 64 340 - -
Pste5g03130 638 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Pste5g03130 638 MobiDBLite consensus disorder prediction 519 586 - -
Pste5g03130 638 ProSiteProfiles Protein kinase domain profile. 65 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03130 638 SUPERFAMILY Protein kinase-like (PK-like) 64 311 IPR011009 -
Pste5g03130 638 MobiDBLite consensus disorder prediction 510 638 - -
Pste5g03130 638 Pfam Protein kinase domain 66 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03130 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pste5g03130 638 MobiDBLite consensus disorder prediction 587 609 - -
Pste5g03130 638 CDD STKc_MAPKKK 64 310 - -
Pste5g03130 638 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 318 - -
Pste5g03130 638 Gene3D Transferase(Phosphotransferase) domain 1 64 341 - -
Pste5g03130 638 Coils Coil 589 609 - -
Pste5g03130 638 SMART serkin_6 65 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03130 638 Coils Coil 98 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03130 Pste-Chr5 24374251 24380940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03130 1 638 MAP Kinase Kinase Kinase AT1G54960 56.753 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste5g03130 Pkinase 2.9e-56 CL0016