Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03126 TTTGTCACAACCCTTTCCCTCCTAAACATAATCAGTTGTGAAGATGAGGTGAAGAGAACACTGATACAGTTTCTGTCACAAGTCTCAGGTCATAATGATGGCCAATACAACTCCACTTTGGTTTGGAAACAAGACTCTGATCCTTGCAAGGATCTTTGGCAAGGTGTATACTGTGATCCTCATAACATGTCCATAAAGAGGTTACTACTTGACAGCTTCAACTTTTCTGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCAGCCCTTGGCTGCATCTCTCACCTTTCTTAGCCTAGATGGTAACAAAATTAGAGGGGTAATAGCATCTGAGATTGGAAAATGCACACAACTCACTCGGCTTCACCTTAGTGGAAACCAACTTGCTGGAGAGCTTCCTAGTTCACTTGCCATGTTAGACAATTTGAAGAGACTAGACATTTCAAATAACCACTTTTCAGGAGCTTTGCCAAACTTGTCTAGAATCTCAGGGCTGAATATGTTTCTTGCACAAAACAATCACCTTAGAGGAACCATACCTGCCTTTAATTTATCCAATTTTGACCAATTCAATGTCTCCTTTAACAATTTCAGTGGTCACATTCCAATCTTGCATGGCTATTTCTCTGCTGACAGCTTCCTTGGAAATCCTGACCTATGTGGAGATCCTCTAACAAAAAATTGCACTAGTAATGATTCTATGCCTCTTAGTGAGGCTCATGCATCAGAAGAATCAAAGGGTCCTCCTAGGGAGCAGATTCTTATGTACTTAGGCTATGCTGCATTGGGTGTTATCATTGTTGTTTTAGTAGTCCTAAAGCTGTGTAGAAGAAAGAAGGGAGAGAATAAAATTGAAGCAATGGATACTGGGGTAAGTGCCAATGATGGTGGCGTTGAAAAGCTGAGCAACAATGTTTCAAGTGAATACAAAGCCGAGGTAAGTAGATCTGAGTTTTCTGTCACTTCTGAAAGCGGGATGGTTTCACCATCACTCATAGTTTTTTCAAGGCCAGCAGCAACAGAATTGAGATTGGAGGACTTGTTGAGGGCCCCAGCAGAATTGATTGGCAGAGGAAAGAATGGAAGCCTTTATAAGGTGATGCTTGACAATGGGATAATGGTGGTTGTTAAAAGGATCAAGGATTGGACTATTCCAAGCCATGATTTCAAGCAAAGAATGCGAATACTGAGTGAAGCCAAGCACCCTCATGTACTGTCACCTCTTGCTTTCTATTGCTCCAAACAAGAAAAGCTTTTGGTGTATGATTATCAGCAGAATGGAAGCTTACTCAAACTCCTACATGGCACTCCAAAAACCTTAGACTGGACCAGTAGACTTGGGATAGCAGCTACAATTGCTGAGGCATTAGCTTTCATGCATCAAGAGCTAGGCCATCATGGTATTGTTCATGGTAACCTGAAATCCTCTAACATTTTGCTAAACAAGAATATGGAGCCATGTATAAGTGAATATGGTGTCATGCGAATGGATGATCAAAGAGCTTCACCTTTTGCAAGTCCTATGGATACTGGCGCATTAGACATCTTTAAGGGAGATGTTTATGGCTTTGGTGTGATTCTTCTAGAACTGCTTACTGGTAAGTTAGTGAAGGGCAATGGAATTGACTTGACTGACTGGGTTCAATCTGTTGTAAGGGAAGAATGGACAGGTGAAGTTTTTGACAAGTTCCTAATATCAGAGTGTGCAAGTGAGGAGAGAATGGTCAATTTGCTTCAAGTGGCTATAAGATGTGTCAATGGTTCACCAGAAGCTAGGCCAAGCATGAACCAAGTTGCTCTCATGATTAACACTATCAAAGAGGATGAAGAAAAATCGTTGATTTATGAAGTG 1851 0.4117 FVTTLSLLNIISCEDEVKRTLIQFLSQVSGHNDGQYNSTLVWKQDSDPCKDLWQGVYCDPHNMSIKRLLLDSFNFSGTLDVAMLCNLQPLAASLTFLSLDGNKIRGVIASEIGKCTQLTRLHLSGNQLAGELPSSLAMLDNLKRLDISNNHFSGALPNLSRISGLNMFLAQNNHLRGTIPAFNLSNFDQFNVSFNNFSGHIPILHGYFSADSFLGNPDLCGDPLTKNCTSNDSMPLSEAHASEESKGPPREQILMYLGYAALGVIIVVLVVLKLCRRKKGENKIEAMDTGVSANDGGVEKLSNNVSSEYKAEVSRSEFSVTSESGMVSPSLIVFSRPAATELRLEDLLRAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWTIPSHDFKQRMRILSEAKHPHVLSPLAFYCSKQEKLLVYDYQQNGSLLKLLHGTPKTLDWTSRLGIAATIAEALAFMHQELGHHGIVHGNLKSSNILLNKNMEPCISEYGVMRMDDQRASPFASPMDTGALDIFKGDVYGFGVILLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKFLISECASEERMVNLLQVAIRCVNGSPEARPSMNQVALMINTIKEDEEKSLIYEV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03126 617 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Pste5g03126 617 Gene3D Transferase(Phosphotransferase) domain 1 425 616 - -
Pste5g03126 617 ProSiteProfiles Protein kinase domain profile. 349 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03126 617 PANTHER OS05G0588300 PROTEIN 7 607 - -
Pste5g03126 617 Pfam Leucine Rich repeats (2 copies) 116 159 IPR025875 -
Pste5g03126 617 SUPERFAMILY L domain-like 42 204 - -
Pste5g03126 617 Pfam Protein tyrosine and serine/threonine kinase 353 599 IPR001245 GO:0004672|GO:0006468
Pste5g03126 617 Gene3D Phosphorylase Kinase; domain 1 322 423 - -
Pste5g03126 617 Gene3D Ribonuclease Inhibitor 12 228 IPR032675 -
Pste5g03126 617 SUPERFAMILY Protein kinase-like (PK-like) 352 601 IPR011009 -
Pste5g03126 617 FunFam Leucine-rich repeat receptor protein kinase EMS1 88 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03126 Pste-Chr5 24343541 24345973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03126 18 607 Receptor kinase-like Gene Family AT3G17840 34.227 1.57e-88 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste5g03126 PK_Tyr_Ser-Thr 1.7e-22 CL0016