Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03117 CAACCTTTACTCAACTAATTTTTGTTGTAAAACTTGACTACACCTTGAATAATATCTTTTTTCGTTTATTTTTATACATAAGATTCAAACTCAAACTTCAGTTCCAAGCCCAGTGTCACTTGAACTTGAAGAAATGACTTGTTAGTGAGTAGTGAGTATTTGGCTTCATTTCATTCCCCGTTTGGCTCTAACTAGAGATATTGAAGTGAAGATGGTAAAAAGGGTCTTGTACTCTGATTTGCTTCCCTTTGGGGCCATGGTCACCATGGAGTGCCTCAACGTTGCCTTGAATACTCTGTTCAAAGCTGCTACCTTGAGAGGGATGAGTTACCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTATTGTTCTCCTTCCAGCACCCTTTATCTCCAAAAGATCAAGAGTGCTTCCTCCACTCAGCTTCCCCTTACTGCGCAAAATCGGTCTTCTTGGGTTAATAGGGTGTGCATCTCAGATCATGGGATACACAGGCATCAGTTTCAGTTCCCCCACTCTCTCCTCTGCTATAAGCAACTTGGTGCCAGCTTTTACTTTTTTGCGTGCCATCATTTTCAGGATGGAAAAGGTGATTGTAAGAAATGCTAGTAGTCAAGCTAAGGTGTTGGGTACCATAGTATCAATAACAGGAGCATTTGTAGTGACTCTCTACAAAGGACCACCAATCATCATTGTTCATGCACCTTCATTGTCACTTCACAAACTTCTGATGAATTCAGTAGATAGAAGTTGGGCCATTGGTGGCCTTTTACTTACTGCAGAGTATATACTGGTTCCCTTGTGGTACATTGTACAGGTGCAAATCATGAAGGTGTACCCGAATGAATTAACTGTGATCTTCTTTTACAATTTATGTGTAAGCATCATGGCTGCAATTGTAGGGAATTTTTGGTTCATTCGTGAACAATGCAGTTCACACATGGGTACTACGTATAAAGGGGCCTGTCTATGTTGCAATGTTCAAGCCACTCTCAATTGCCATAGCTGTTGCCTTGGGAGTCATGTTCCTAGTCTAGTGGGAGCCACAATAATATCAATTGGATTTTATACTGTAATGTGGGGAAAAGCAACAGAAGAGGTGGAACAAGATGTCCCTGGCCAGCAATTACCAATCACAGAGAATGTTCCTCTCTTGCAAAGCTATAAAACTGATGCAGCTGAAAAGAAAAAGCATGGAATTGTATAAAAGACAAACAAAACTGTTCATAGTTCTTAACACCATATATAACCCAATTTTAGGAACAGAAGCAACATGTAGCATGGTTCATCAATCCTTAAATATGTGGTCAGAAATTCGATCTCTACTAGGTGCATATTGAACAACATCTTTCATAGGTCAACTTCTTAAATGATCTCAAATCTAGAGATTAGCCTAGCCTTTCGCTCGAGGGATAGCAAAAAGAAAATTGTAGTAATAGTCAATAGAATGGCAAAGCAAACGAGACTTTGGAAGATAAAAAGAATTGTTTTGTTGTAACAAATCATCAATAAATTAGGAAGCAACCTATGTGCAAGCTGGTGTACAAACAACTACAGATGTGACTATATATATGGCAATGGAGCTACTGCCTGTCTCTTGTAACAAGTCATCCACATTATTTTTTGTATGGTATATTTTGATGTCCATACTTAAAATTGATGATGTGTGAGTAACCACATATTTAACAAGAG 1695 0.3882 MVKRVLYSDLLPFGAMVTMECLNVALNTLFKAATLRGMSYHVFVVYAYAVAAIVLLPAPFISKRSRVLPPLSFPLLRKIGLLGLIGCASQIMGYTGISFSSPTLSSAISNLVPAFTFLRAIIFRMEKVIVRNASSQAKVLGTIVSITGAFVVTLYKGPPIIIVHAPSLSLHKLLMNSVDRSWAIGGLLLTAEYILVPLWYIVQVQIMKVYPNELTVIFFYNLCVSIMAAIVGNFWFIREQCSSHMGTTYKGACLCCNVQATLNCHSCCLGSHVPSLVGATIISIGFYTVMWGKATEEVEQDVPGQQLPITENVPLLQSYKTDAAEKKKHGIV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03117 332 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Pste5g03117 332 PANTHER WAT1-RELATED PROTEIN 266 300 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03117 Pste-Chr5 24258860 24263221 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03117 1 322 Nodulin-like Gene Family AT3G28050 47.139 4.74e-97 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03117 5 24258860 24263221 Pste5g03117 5 24258860 24263221 ECH
Pste2g03038 2 30380876 30384505 Pste5g03117 5 24258860 24263221 ECH