Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03108 TTGTGGTGTTTATGCCAACATTGCAATGGAGGTTCTCAAAGATAGGTGCCTAATATCTGTTTTGGAAGATAGAATTGTGATGCACGATCTGATAAAAGAAATGCCACATGAAATTGGGGTCAGATGCAATACAATTTCTGTAACAATTGTTATCGGAGAGAATAAAATGTGTTTCTTGAATCAACTCTTGAAAATCTTCCGGATGTTCTTTACCGCAGAACTTCTGCCCAGAAAGTCTCGTCAGACTAGAAATGCGAAATTGTCATCTTCAACATCTTTGGAAACCATATTAGGAAAAATAGATATATTAATGAAGAAAAGGATGAGTAAAGAAACCGAAGTGGTTCCAAGAGGAATAGGACATCCTGTTACTCATTCCTTATACAGAGGAAAAGGAGGGTATTCAACGGGATATTCCTCAAATTATTATGGTGACAAATCGAAAGAAGTGATTAAAAAATTGGATTCTTCTTTTTCTTATCCTCATTCTCCTGATACTTTTGACCCAGTTGTCAGTATTGATGACAGGCATCAAGAACCAGAGAAGAATGATATACACTTAGACTTATTTCACCAACAGAAGCAGATTATTAAAGGTGTGTTCTCAACATTTTCAAGTTCAAATGAGTTGTGTTGGTTGGATCTCTCTAATTGTAAATCCCTTACAAGCCTTCCACTTGAGTTTGACCTTTCTAAGTTAAAATTCTTAAAAAAACTTATTCTCCGTAGTTGCTCAAATTTGGAAAAGTTTCCTGAAATTGAGAATACCATGGAAAATCTAGAGAGCACATCACTGCAAACACTACCTTCATCCTTGTGCCGTTTGGTGGGGCTTGAAGAATTGAGCTTGTGCAGCTGCGAGAGCCTTGAGATTATTCCATCTTCCATTGGAAATCTCAGCAAACTCAGCAACTTAGGCCTTACTAACTGTAAATCACTAAAATCTCTTCCCTGCAGCATTTTCAAATTGAAGCTGAGGAAACTTGATTTGTGTGGTTGCACAATGCTGGGGACCCTCCCAGAGATCATGGAGCCTGCAGAAACTTTTGCTCACCTTGACTTATCAAAAACGGCTATTAAAGAATTGCCATCATCATTAGCCAATTTGGTTCGGCTTCAAACTCTAAGTCTGAACATGTGCACGAATTTGGACTCACTTCCAAATAGCATTGTTAATCTAAAGCTTCTCTCAAAACTTGATTGTTCAGGGTGCGCCAGATTAACAGAAATCCCAAGTGATATAGGTCGCTTGTCTTTGTTAAGGGAAGTGTCACTGAGTGAGAGCGCAGTTGTGAACCTTCCCGAGAGCATTGTTCATCTTTCAAGCTTGAAGTTACTTGATTTAAGTGATTGCAAAAATCTTGAATACATCCCTCAGCTTCCACCATTTTTAGAACAACTATTGGCATTTGATTGTCCTTCCATTAGAAGAGTGATGTCAAATTCACTTATTCAAATACCATCTAATTTCAAAGAAGGTGTCTTCAAATTTTATTTCACCAATGGTCAACAAATGGATCCAGGTACTCGTGCTAATATTTTGGATGATGCAAGGCTTAGGATGACTGAGGATGCATATAGGTCTGTGTTCTTTTGTTTTCCCGGGAGTGCAGTTCCTTATTGGTTCCCTTTTAGTGCCAAGGGACATTCAATGACTATAAATACAGATTCTCTAAATTATTCTAGTGATGATAGACTCATTGGTTTTGCTTTGTGTGTCGTTTTGGGAATGTTAGATATGAATGATATTGATAGTAGGTGTGGTTCTTTTAGTTACAGCCTCAAATTTAGTTCAAAAGATGGCACAAACATTCTTCCCAACAATCATCTCTTAAGAAATAATTTCAAGTGGAAGGGTCGACAGAGAATAGTTGATCAAGATCACACATTCCTGTGGAAATATAACCTGGAATCACCAAGGATGAGCAGCATGAGCCTTATGCTCTGTGATGCTCGCAGTTTCACTTTTGAGATCAACCCAGATGTCTATAGCCCTTATGACTATGGCTTTAGGCGGCCAAGTTTCAAATCAATTGTCAGAGAGTTCAAATCAACTGTCATAGTAAAAGAATGCGGAATATGCCCTCTTTACCCCAAAGAAAATTATGATAATGATGCTGTTGCTAGTGATGATCATTCTAGCTTTATGAGATTTTCAAAAACTGACATGGAAGAACCTAGTGGATCCAACATTGATAACTTGGCTTCTTGTGTTTTCCACAACTACGATTGCTTGAACGTCTTTCAGATTTTGGGTTCATTAACTTCTTTAGCATCCAAACAGAGCTTGATCCCCTGCACGAGCATGGCGAGAGGAACCTACTACCATATGTGGCAAGGATCATGGAGAAAAACGGCAAGTCGTTTAAACGAAAACACGATTTCAGAAAATTTCTAGCAAAAGCACTTTCCTCTCTTTGGTGACAGCAAGTCGATAAATGAAAAAAACAGGTTAAAATAGAATCACTTTAAGTTTGTTTAATTAACACTTTAATTATAATTATTTATTAAAATTTTACAAATTATTATTATGTTTTTTTATTATAACTCTTCTT 2555 0.3714 MEVLKDRCLISVLEDRIVMHDLIKEMPHEIGVRCNTISVTIVIGENKMCFLNQLLKIFRMFFTAELLPRKSRQTRNAKLSSSTSLETILGKIDILMKKRMSKETEVVPRGIGHPVTHSLYRGKGGYSTGYSSNYYGDKSKEVIKKLDSSFSYPHSPDTFDPVVSIDDRHQEPEKNDIHLDLFHQQKQIIKGVFSTFSSSNELCWLDLSNCKSLTSLPLEFDLSKLKFLKKLILRSCSNLEKFPEIENTMENLESTSLQTLPSSLCRLVGLEELSLCSCESLEIIPSSIGNLSKLSNLGLTNCKSLKSLPCSIFKLKLRKLDLCGCTMLGTLPEIMEPAETFAHLDLSKTAIKELPSSLANLVRLQTLSLNMCTNLDSLPNSIVNLKLLSKLDCSGCARLTEIPSDIGRLSLLREVSLSESAVVNLPESIVHLSSLKLLDLSDCKNLEYIPQLPPFLEQLLAFDCPSIRRVMSNSLIQIPSNFKEGVFKFYFTNGQQMDPGTRANILDDARLRMTEDAYRSVFFCFPGSAVPYWFPFSAKGHSMTINTDSLNYSSDDRLIGFALCVVLGMLDMNDIDSRCGSFSYSLKFSSKDGTNILPNNHLLRNNFKWKGRQRIVDQDHTFLWKYNLESPRMSSMSLMLCDARSFTFEINPDVYSPYDYGFRRPSFKSIVREFKSTVIVKECGICPLYPKENYDNDAVASDDHSSFMRFSKTDMEEPSGSNIDNLASCVFHNYDCLNVFQILGSLTSLASKQSLIPCTSMARGTYYHMWQGSWRKTASRLNENTISENF 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03108 790 PANTHER LEUCINE-RICH REPEAT-CONTAINING 251 397 - -
Pste5g03108 790 Pfam C-JID domain 525 692 IPR045344 -
Pste5g03108 790 SUPERFAMILY L domain-like 188 460 - -
Pste5g03108 790 Gene3D Ribonuclease Inhibitor 340 485 IPR032675 -
Pste5g03108 790 Gene3D Ribonuclease Inhibitor 253 339 IPR032675 -
Pste5g03108 790 Gene3D Ribonuclease Inhibitor 174 252 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03108 Pste-Chr5 24153944 24160501 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03108 290 450 WRKY Transcription Factor Family AT4G12020 32.099 6.21e-09 58.2