Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03094 ATGGGTCCTGGTTCTCAGGCTTACACCATGGTTTTCATCATTGCCATATTGATGTTCCTATCATTGCCAAGCGCCAACATTTTAACTGTGGATGCTTTGTTGCATGAAGCACGAAATGAAAATCAAATCAAGAAAATCTCAGGAATGGACGAAAATGAAATGAATCAAAGTCCTATAGTGGAAAACTTTAAAGCTTTGCTTGGAGTCAACAGTTTCAAGTTCAACACAAGAAGGCCGTGCTATAGAGTTTCTGACTCTGATTTTGTGCCCCTCTCACCTTCTCTGTCACCCAACACCGAAGCTGAGGCACCTTCTCCAGAGTTGCACGTGCACCCTCGTTCCCATCACTTAGATCATGGGAACATGCCACTCCAAAAGATTCAACAAGAAGATAGAGGTAGGGCAAAAAGAACAACACTAGTAGCTGTTGTAGTACCTGCAGGTGGAGTTGCCACGGTAATTTTTGCACTTGGTTGTGTCTGTGTTTGCAAGAAATTCAGAAGTCAGAAAAGAAAACCCAATAAGACAATGCCACTCTTTAGCAAGAACGAAAGAACAGAAGGTACATACCAAAATTCATCAAGCAATGGGAGTTTAAACTCTGACCCAGATCTGTTTTACCTCACTTGTTTGAAACAAACTTGTGACACACAATATAGCAATTCAAGCCATGGTTCCCTAAAAATTCTCTCTGTTCACGAGGATGTGGAATATGAAGGTGCCAAAGCTTCCTCCGCAGAAAAGGCTGTTACTGAAGACTGCCATAGCCATTCATCAGATAGTGAAACTTTTCATTCATGTGTTGATTCGCATTCATCAATAAGTGAAACAGAAACGCTATCTCTCTCGCCTAGAAATTCAATTTCTTCAACAAATCAATTTCCTTGCTCCCCTCAGAATTCAACCACTAAGGTAAGATCTAACCAATTACAGTCGCTATGCATTCCAAAACAGGAAGAGCAAAAGAAGATTCAAACATCTCAACCTAGCATTCCTCCCCCACCATGTCCACCTCCACTTTTGAAAGGAAACAATAACAGTGTGATCAAAACCCCACCTCCTCCACCTTTTCAACTTCGTCATGGTAAGGGTGAAAGTACTCAACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGGGCCACGCCAGATCGAACAATGGTTTGGGATAAGCTTCGAACAAGCTCATTTGAGTTGGATGAGGTAATGATTGAGTCACTCTTTGGCTGCAATTTGCAAAATTCAATGAAGAACGAGGAAACAAAGAGCAAAACCCCGTCTCCAAGGAAGCATGTACTCGAGCCAAAACGGTTGCAAAACATAGCAATACTCTCGAAAGCTCTAAACACCACAGCTGAGCAAGTATGCGAGACCCTGATACTAGGGAAAGGGTTGTCTTTGGAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGCCAAGCTCTTGAGCTACAAAGGAGACATCAATGAACTAGGGTCCGCAGAAAAGTTAGTGAGATCAATGCTTAGCATACCATTTGGCTTTCAACGAGTGGAAGCCATGCTTTACAGGGAGACTTTCGAAGATGAAGTAGCTCATGTCAGTAACTCTTTCACAATGTTAGAGGTAGGTGCAGAAGCAGAACCCTTTGAAAGCAGTTTGTTGCGCACGTTTTTGTGTTTTGACATGATAGATTCTGTGATACCATACCAGGAAGCGTGCAAGGAACTGAGGTCAAGCAGGTTCTTCTTGAAATTGCTGGAAGCAGTTCTTAAAACAGGGAACCGAATGAACGTTGGTACAATCAGGGGAGGTGCCAGAGCCTTCAAACTCGATGCCCTTCTGAAGCTTGCTGATGTTAAAGGAACTGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATTGTTCGCTCAGAAGGAATCAAAGCTTGGGAGAGGATGGGGAGTGAAAACAGAACGGAAGAGAAGGAAGAAGATTATAAAAGAATAGGACTAGAGCTTGTTTCTAGTCTTAGTGCTGAGTTATGTAATGTTAAGAAGACGGCCACAATTGACTTGGATGTTCTTTCAAGTTCCATCTCAAACCTATCAAGTGGAGTGGCTAACATTCACAATCTAGTAAAGGGGCTGCTGTGTGAGGATGAAAAAAGTGAGAGCTTTGTCATTTCTATCAGGTGGTTTCTCAATTATGCAGAAAGAAAGGTGGTGAACTTGCAAGGAAATGAAACTAGAGTGATGGGTCGAGTCAAGGAAATAACAGAATATTTTCATGGGGATGTGAGCAAAGAAGAGACGAATCCACTTCGAATATTTGTGATCGTGAGGGACTTTGTGGAGATGGTAGATAATGTGTGTAATGAGCTCAAAAGGTCTACAAAATCCCTTCGCACCTAG 2397 0.4247 MGPGSQAYTMVFIIAILMFLSLPSANILTVDALLHEARNENQIKKISGMDENEMNQSPIVENFKALLGVNSFKFNTRRPCYRVSDSDFVPLSPSLSPNTEAEAPSPELHVHPRSHHLDHGNMPLQKIQQEDRGRAKRTTLVAVVVPAGGVATVIFALGCVCVCKKFRSQKRKPNKTMPLFSKNERTEGTYQNSSSNGSLNSDPDLFYLTCLKQTCDTQYSNSSHGSLKILSVHEDVEYEGAKASSAEKAVTEDCHSHSSDSETFHSCVDSHSSISETETLSLSPRNSISSTNQFPCSPQNSTTKVRSNQLQSLCIPKQEEQKKIQTSQPSIPPPPCPPPLLKGNNNSVIKTPPPPPFQLRHGKGESTQLPKLKPLHWDKVRATPDRTMVWDKLRTSSFELDEVMIESLFGCNLQNSMKNEETKSKTPSPRKHVLEPKRLQNIAILSKALNTTAEQVCETLILGKGLSLEQLEALVKMVPTKEEEAKLLSYKGDINELGSAEKLVRSMLSIPFGFQRVEAMLYRETFEDEVAHVSNSFTMLEVGAEAEPFESSLLRTFLCFDMIDSVIPYQEACKELRSSRFFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGIKAWERMGSENRTEEKEEDYKRIGLELVSSLSAELCNVKKTATIDLDVLSSSISNLSSGVANIHNLVKGLLCEDEKSESFVISIRWFLNYAERKVVNLQGNETRVMGRVKEITEYFHGDVSKEETNPLRIFVIVRDFVEMVDNVCNELKRSTKSLRT 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03094 798 SUPERFAMILY Formin homology 2 domain (FH2 domain) 375 792 - -
Pste5g03094 798 SMART it6_source 362 797 IPR015425 -
Pste5g03094 798 PANTHER FORMIN-RELATED 23 793 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste5g03094 798 MobiDBLite consensus disorder prediction 249 303 - -
Pste5g03094 798 Pfam Formin Homology 2 Domain 570 783 IPR015425 -
Pste5g03094 798 Pfam Formin Homology 2 Domain 367 545 IPR015425 -
Pste5g03094 798 MobiDBLite consensus disorder prediction 173 197 - -
Pste5g03094 798 MobiDBLite consensus disorder prediction 265 303 - -
Pste5g03094 798 ProSiteProfiles Formin homology-2 (FH2) domain profile. 362 798 IPR015425 -
Pste5g03094 798 MobiDBLite consensus disorder prediction 249 264 - -
Pste5g03094 798 Gene3D Formin, FH2 domain 382 797 IPR042201 -
Pste5g03094 798 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03094 Pste-Chr5 24002552 24005319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03094 350 790 FH2 protein (formin) Gene Family AT3G05470 63.877 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03094 5 24002552 24005319 Pste5g03094 5 24002552 24005319 ECH
Pste5g03094 5 24002552 24005319 Pste4g01161 4 8666028 8669889 PCT