Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03075 GTGTGCTGCATGCTTCAGACAGTTCAACAAACTGGAGCACCTTGTGGAGCACATGAGGATCTCATACCATTCAGTTCATGAACCAACTTGTGGCATTTGCAGGAAACATTGCAGATCATATGAATCTTTGAGGGAACATCTTATTGGTCCGTTGCCAAAACAGGAATGCAGAGATATATTTGCCTATATAGGGTGCAAGTTTTGTTTGAAAGTCTTTGACAGCCCTAACTCTCGCAGGATCCACCAAGAAAAATGCCAATTCTCTGGAGCAAATGCTGGAATAATTGGTCGCTTTTCAAACTTAGGACTTCGTGATAATTTGGGTATTATTGGTGGTGGAGCAAGAGGACCACAAGTAGTTGCACTAGCATGTAAAATGGTTGGAGGTGGCAGTGATGGCTCACTGGATCTCTGTGCAAGAGTGTGCTTAATGGATGAGCATGAGAGCATAATATTTCATTCTTATGTGAAGCCACCAATTCCTATCACTAACTACAGGTATGAAACAACAGGCATCAGACCAGAATATTTGAGGGATGCAATGCCAATGAGACAAGTTCAGAGGAGGATTCAAGATTTCCTTTGCAATGGTGAACCTATGTGGACAATTAGGCCAAGAGGTGGAAGGGCAAGGATTCTTGTTGGTCATGGTTTGGATCATGACCTTGAAAGTTTGCAAATAGAATATAGGGCAGAAAAAATAAGGTATGACATTCAAACTGGGATTCAGGATCCTTATGAAGATTGTGTTGCAACAATGAGGCTGTACATGAGAATGAGATCCCAAGTGCATAAATTACAGGATTACCCTTTGGCTTCGGAGCCCCAGAACAGGAATAATTTTGCTTCATGGAGGCAAAGTGAGCTTGAAAGAATGACTCCTGAACAAATGCTAGAAATCTCAAGGTCTGATTACTACTGCTGGTGCTTGGATTCCTTGTATAATCCCTGA 952 0.4202 MRISYHSVHEPTCGICRKHCRSYESLREHLIGPLPKQECRDIFAYIGCKFCLKVFDSPNSRRIHQEKCQFSGANAGIIGRFSNLGLRDNLGIIGGGARGPQVVALACKMVGGGSDGSLDLCARVCLMDEHESIIFHSYVKPPIPITNYRYETTGIRPEYLRDAMPMRQVQRRIQDFLCNGEPMWTIRPRGGRARILVGHGLDHDLESLQIEYRAEKIRYDIQTGIQDPYEDCVATMRLYMRMRSQVHKLQDYPLASEPQNRNNFASWRQSELERMTPEQMLEISRSDYYCWCLDSLYNP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03075 299 SMART exoiiiendus 101 248 IPR013520 -
Pste5g03075 299 Pfam Exonuclease 118 217 IPR013520 -
Pste5g03075 299 Gene3D - 99 221 IPR036397 GO:0003676
Pste5g03075 299 SUPERFAMILY Ribonuclease H-like 115 244 IPR012337 -
Pste5g03075 299 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 218 294 IPR047021 GO:0004527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03075 Pste-Chr5 23840960 23843244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03075 1 296 C2H2 Transcription Factor Family AT3G27970 65.635 1.28e-165 462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03075 5 23840960 23843244 Pste5g03075 5 23840960 23843244 ECH