Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03070 TCTTAAACAAAAAAAAAAGGAAAAAAAGAACAAAAACGTAGCTTCTCTCACTTCACAATTCACATGCTCTGTTTCCACTTTCCACAGAGCCATAATAACCCAATCTCACCTTCGATTCAATCTCCACAACCAACCATGCTTCCTCTGCAATTCGCCACCGTCCCTCGCCGCGCGCCGCCGCTGTTTCCGAGAAGCTCCGACTCTGTCGCTGGCTCCTCCTCCTCTCGCGCGTTCCTCTTCTGCGGAAACAACAATGTGCGCTTTGCTTGCTCCAACGTTGGAGCCCTCGATCTTAGGGTTTTCGCTCTGGCTGGTTATGGTGGTAATGGTAACGCGTTCAGGATGAACCTCAACGAGTATCTTGTCACTCTCGAGAAGCCCCTCGGCATCCGATTCGCCCTCGCTGCTGATGGAAGAATTATCGTTCACTCTCTCGCAAAAGGGGGTAATGCGGAGAGGTCCAGGATAATTATGGTGGGGGACACTTTGAAGAAAGCAGGAGATTCGGCTCAGAACACTCTTGTGGAGATTAAAGACGTTGGAGATACACAGTATGCCTCCCCATTTTGTGCTCTAGGACATGTTTGGATTCAGGAAATGTCTTTTGGTTTCCTCAGGAAGGCGCTAAATGAGCAAACAAGTTCTTTTAGCTTGGTTCTTGAGAGGCCCACATCTCCTTTTCCCATTCAACTACTGCACAAGATGAATGATCTTGAAATAGTGTTTAATAGAGGCCGAGTTCCTATTGCCACATGGAACAAGGCTCTTTTGGCATCAAATTTACAACCATCTAACGAGAGTTGTGGGAATTCTGGATTTTTGGTGTTCAACTCAAAGTTTCTTAAACCAAATGGAAGCAAGTTATTGGGCAATCAAAGTCAACATACCATCACTCATGGTGAGAGAAACTTTGTAACTGAACGCACAACACAACTTGCTTGTGTTTTTACTGAAGAAGTGTGTGGAGATGGAGATTGGTCTCATGGAAGTTTTCCACTTGAAGAGTATATTCAGGCTCTGGATCGTTCTAAGGATGAGATGTACTATAATCATTCTCTTGGTATGCGCTATAGTAAGATTACAGAGCAAATATTTGTTGGATCCTGTATACAAACAGAAGATGATGTAGAAACCTTGTCAAAGGATGAGGGAGTTACTGCTGTTCTGAACTTCCAAAGTGGAACTGAAGCTGAAAATTGGGGAATCAATGCTAAATCAATTAATGAATCTTGTCAACGGCATAATATTCTCATGATCAACTTTCCTATACGGGAGGGAGATTCTTATGATATGAGAAAAAAGCTTCCATTTTGTGTGGGCCTTTTATTACGGTTGCTAAGGAAGAATCTTCGTGTTTTTGTGACTTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTACATTGGATGACTGATGTTTCCCTTCATGCAGCATATACTTGGGTCACTGGGATGCACACATGCAGGCCTGACAGGCCAGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAACGGCAGACATGATGGACCTCCAACACATGCTGTCACGTTTGTGTGGAATGGTCATGAGGGAGAGGATGTAAATTTGGTAGGAGACTTTACAGGAAATTGGAAAGAACCACTCAAGGCTAAGCACCAAGGTGGATCAAGACACGAAGTGGAAGTTAAACTTCCACAAGGAAAGTATTACTACAAGTTCATTGTTAATGGACAATGGAAGCATTCAACTGCTTCACCAGCAGAGAGAGATGACAGGGGAAACGTTAACAATATAATTGTGATCGGCGAAACTGCCAGTGTTCGGCCTTCTGTTCAGCACCAACAAAAAGATGCCAACGTTGTGAAGGTGATTGAAAGGCCTTTGAATGAAAAGGAGCGGTTTATGCTGGCAAAAGCAGCTCGTTGCATTGCTTTCTCTATCTGCCCTATCAGATTAGCTCCGAAATAGTTGCATGCAAATATCACAATGTACAGAATCGCTGTTGTTGCACACGTTACAGGGGCCATACAAGATTTGGTCACAGTGGTGAGGGAAAGTAAAAAAGAAGAATCACACGCTGGGGTATGTCTTGGCATTCAACTCTTGAAATAAATGAGATAAATCTTTTTTATTGCACTGCCAAACTCCAATAAATAGTTAGCCATTATATCATAGTATGAATTCTCACACAATACTGGCTGTTAAATGTTGGCCTAAGTAAATCTGTTATTATAAAATAAATGTTGTGAATACCCTCTTAGTTTGAATTGACAGGTAGTACTACTACTTGTCACAGTTTGATTTTTTAAATAATATGGATCCATATTTTTTTTCAG 2339 0.4233 MLCFHFPQSHNNPISPSIQSPQPTMLPLQFATVPRRAPPLFPRSSDSVAGSSSSRAFLFCGNNNVRFACSNVGALDLRVFALAGYGGNGNAFRMNLNEYLVTLEKPLGIRFALAADGRIIVHSLAKGGNAERSRIIMVGDTLKKAGDSAQNTLVEIKDVGDTQYASPFCALGHVWIQEMSFGFLRKALNEQTSSFSLVLERPTSPFPIQLLHKMNDLEIVFNRGRVPIATWNKALLASNLQPSNESCGNSGFLVFNSKFLKPNGSKLLGNQSQHTITHGERNFVTERTTQLACVFTEEVCGDGDWSHGSFPLEEYIQALDRSKDEMYYNHSLGMRYSKITEQIFVGSCIQTEDDVETLSKDEGVTAVLNFQSGTEAENWGINAKSINESCQRHNILMINFPIREGDSYDMRKKLPFCVGLLLRLLRKNLRVFVTCTSGFDRSPACVIAYLHWMTDVSLHAAYTWVTGMHTCRPDRPAIAWATWDLIAMVENGRHDGPPTHAVTFVWNGHEGEDVNLVGDFTGNWKEPLKAKHQGGSRHEVEVKLPQGKYYYKFIVNGQWKHSTASPAERDDRGNVNNIIVIGETASVRPSVQHQQKDANVVKVIERPLNEKERFMLAKAARCIAFSICPIRLAPK 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03070 635 ProSiteProfiles Dual specificity protein phosphatase domain profile. 335 494 IPR020422 GO:0006470|GO:0008138
Pste5g03070 635 FunFam Phosphoglucan phosphatase LSF1, chloroplastic 489 585 - -
Pste5g03070 635 Gene3D Immunoglobulins 489 585 IPR013783 -
Pste5g03070 635 CDD E_set_AMPKbeta_like_N 502 581 - -
Pste5g03070 635 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 87 633 - -
Pste5g03070 635 FunFam Phosphoglucan phosphatase LSF1 chloroplastic 328 494 - -
Pste5g03070 635 CDD DSP_laforin-like 334 480 IPR045204 GO:0019203
Pste5g03070 635 Gene3D Protein tyrosine phosphatase superfamily 328 595 IPR029021 -
Pste5g03070 635 Pfam Glycogen recognition site of AMP-activated protein kinase 502 583 IPR032640 -
Pste5g03070 635 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 325 468 IPR029021 -
Pste5g03070 635 SUPERFAMILY E set domains 499 582 IPR014756 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03070 188 635 Protein tyrosine phosphatase (PTP) family AT3G01510 68.527 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03070 5 23801307 23813840 Pste5g03070 5 23801307 23813840 ECH