Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03048 ATGGGGGGAGACGCACAGAAGAAGAGAATCGCCATCATTGGTGTCTCTACCTTCTTACTGGTGGCTATGGTGGTAGCTGTGACAATAAGTGTGAGCCTGAACAAGGGAGCGAATGAAGCAAAGGAAGAAAGTAATGACTCCCATGTAGCTTCGTCGATGAAAGCCGTGAAAACACTTTGTGCACCCACCAATTACAAGGAGGAATGCGAGGAAAGTCTGAGCAGCGCAAACAGTGGCAACACCACCGACCCAAGAGAACTCATACAAATAGTGTTCAACGTGACCATAAAAAAAATAGGCGAGGGACTTGAGAAAACACACATGATGGATGAGGTGGAGAACGACCCAAGGACCAAGGAGGCACTCGACACCTGCAAGCAACTCATGAACCTCTCGATCGCCGAGTTCACCCGCTCGCTTGACAAGTTCAAAAGGTTCGACCTCAGCAACTTCAATGCCTTGCTCACCAGTTTGAGGGTTTGGCTCAGCGGTGCAGTCACGTACCAAGAAACATGTCTTGATGCTTTTGAGAACACAACCACCGATGCCAGCCAAAAAATGCAGGGGTTCTTGCAATCCGCCATGCGAATGAGTAGCAACGGCCTCGCCATCATAACTGAGCTGTCTAATACTCTCTCGGAAATGAACACCGGCAAACCTGCAGGGCGCCGCCTCTTAATTAATAAAGCTGAGGATTTGCCTGTTCTTGGCCACGAAACCGATGACTTTGACCTTCCCGACTGGGTTGATGATCGTGTCGGTGTTCGCAGACTCCTACGTATGACTGGACGGAAGCGGATGGCGCATGTTGTTGTTGCCAAGGATGGCACTGGAAACTTCACCACCATCAATGAGGCATTGTTGCATGTGCCCTCCAAAAACTTAAAGCCTTTTTTTATCTACGTTAAGGAGGGTGTTTACGATGAGTTCGTTGAAGTTTCCAGAAATATGACTCATGTCGTTATGATTGGTGACGGTGGTAAGAAGTCCAGGATCACCGGCAGCAAAAACTTCGTCGATGGAGTTGGGACCTTCAGAACTGCCAGTGCCGCCGTTCTTGGAGATTTCTTCGTTGCCATAGGAATGGGGTTTGAGAACTCAGCCGGCGCTGCAAAACATCAAGCAGTGGCATTGAGGGTTCAAGCTGACAGGTCCATCTTCTATAGGTGCCAAATGGATGGGTACCAAGACACACTTTACGCCCACACCATGCGTCAATTCTACCGGGATTGCGTCATTTCAGGTACCATCGACTTTGTCTTCGGTGATGCCGTGGCGGTTCTCCAAAACTGCACTTTCATGGTCCGAAAGCCATTGGAAAACCAGCAGTGCATTGTGACCGCACAAGGCAGAAAAGAGCTTAACCAACCATCGGGTTTAATCATCCACGGAGGAAGTATTGTGTCAGACCCCAGTTACTACCCAGTGAGGTTTGACAACAAAGCCTACTTGGCTCGCCCATGGAAGAATTTCTCAAGAACCATCTTCATGGACTCATACATTGATGATTTGATCACACCTGATGGTTACATGCCATGGCAAACATCCAACGGTTCAACTGGAACGAACACATGTTTCTACTCGGAGTTCAACAACTACGGCCCTGGTTCAGACATAACTAAGCGCGTCAAATGGGAAGGAGTGAAGACCCTCTCACCACAGGGAATATCTAATTTCTTGCCATCCATGTTCTTCCATGGAGATGACTGGATTAGGGTGACTAGGGTTCCTTACAACCCAGGCCAACCCTCCTCCCCACCACCACCCTCCATCTCCCTCTCCCCTCCATCTCCCCTCCATCTCCCCTCCACCACCCCTCCATCTCCCTCTCCCCCACCACCACCCTCCATCCCTCTCTCCCCCACACCACCTCCATCCCCCTCTCCCCGCCACCACCCCTCCATCCCTCTCCCCCCCCACCACACCTCCATTCCCTCTCCCCCATCCACACCCTCCATCCCTCTCTCCCCCGCCACCCACCCTCCCTCTCCCCTTCCCTCCACCTCCATCTCCCCCTCCACATCTAACTGA 2031 0.513 MGGDAQKKRIAIIGVSTFLLVAMVVAVTISVSLNKGANEAKEESNDSHVASSMKAVKTLCAPTNYKEECEESLSSANSGNTTDPRELIQIVFNVTIKKIGEGLEKTHMMDEVENDPRTKEALDTCKQLMNLSIAEFTRSLDKFKRFDLSNFNALLTSLRVWLSGAVTYQETCLDAFENTTTDASQKMQGFLQSAMRMSSNGLAIITELSNTLSEMNTGKPAGRRLLINKAEDLPVLGHETDDFDLPDWVDDRVGVRRLLRMTGRKRMAHVVVAKDGTGNFTTINEALLHVPSKNLKPFFIYVKEGVYDEFVEVSRNMTHVVMIGDGGKKSRITGSKNFVDGVGTFRTASAAVLGDFFVAIGMGFENSAGAAKHQAVALRVQADRSIFYRCQMDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDAVAVLQNCTFMVRKPLENQQCIVTAQGRKELNQPSGLIIHGGSIVSDPSYYPVRFDNKAYLARPWKNFSRTIFMDSYIDDLITPDGYMPWQTSNGSTGTNTCFYSEFNNYGPGSDITKRVKWEGVKTLSPQGISNFLPSMFFHGDDWIRVTRVPYNPGQPSSPPPPSISLSPPSPLHLPSTTPPSPSPPPPPSIPLSPTPPPSPSPRHHPSIPLPPHHTSIPSPPSTPSIPLSPATHPPSPLPSTSISPSTSN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03048 676 SMART PMEI_2 51 204 IPR006501 GO:0004857
Pste5g03048 676 MobiDBLite consensus disorder prediction 576 676 - -
Pste5g03048 676 Pfam Pectinesterase 269 568 IPR000070 GO:0030599|GO:0042545
Pste5g03048 676 CDD PMEI-like_3 58 210 - -
Pste5g03048 676 Gene3D - 264 582 IPR012334 -
Pste5g03048 676 PANTHER PECTINESTERASE 15 574 - -
Pste5g03048 676 MobiDBLite consensus disorder prediction 580 668 - -
Pste5g03048 676 PRINTS Proline rich extensin signature 586 598 - -
Pste5g03048 676 PRINTS Proline rich extensin signature 602 623 - -
Pste5g03048 676 PRINTS Proline rich extensin signature 623 639 - -
Pste5g03048 676 PRINTS Proline rich extensin signature 644 661 - -
Pste5g03048 676 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Pste5g03048 676 Pfam Plant invertase/pectin methylesterase inhibitor 55 204 IPR006501 GO:0004857
Pste5g03048 676 SUPERFAMILY Pectin lyase-like 269 580 IPR011050 -
Pste5g03048 676 NCBIfam pectinesterase inhibitor domain 41 208 IPR006501 GO:0004857
Pste5g03048 676 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Pste5g03048 676 FunFam Pectinesterase 264 582 - -
Pste5g03048 676 FunFam Pectinesterase 52 209 - -
Pste5g03048 676 ProSitePatterns Pectinesterase signature 1. 294 313 IPR018040 -
Pste5g03048 676 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03048 Pste-Chr5 23577561 23579676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03048 6 667 Carbohydrate Esterase AT3G05610 43.348 0.0 578