Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03046 GTGGTATAGGAAAGAGTGTGAAAGGCAGCAAAAGATGATGGCCCTGTTAAGTTTCGTTTTCATTCTCATGGTTTTACCGTGGTTGGAGGGTGTCTCATACGAAGGCATTCCATCAGAAGTGGAAACCCAAGACATGCAAGCATTGATTGCACAAGCCTGCATGGACATTGAAAACCAAAACTCGTGCCTGACAAACATCCACAACGAGCTCACCAAAATAGGCCCTCCAAGCCCGAGTGCAGTGATGAGTGCGGCACTGAAGGCCACACTGAACGAAGCAAGAGTGGCCATTGACAACATAACAAAGGTCACCACATTGTCTGTGAGTTACCGCGAGCAACAAGCCATCGAAGATTGCAAGGAGCTGTTGGATTTCTCGGTTTCTGAGCTGGCATGGTCGATGGGGGAGATGAGGAGAATACGCGGTGGTGATAGCAATGTGCAACAGGAGGGCAACCTTGAAGCGTGGCTGAGTGCAGCACTGAGTAACCAAGACACTTGCCTTGAAGGGTTTGAAGGCACAGACAGACGCCTTGAGAGTTACATCAGTGGAAGCTTGACACAGGTGACGCAACTTATCAGCAATGTTTTGTCCTTGTACACTCAATTGCATACGTTACCCTTCAAGCCTCCCAGGAACAAAACCACTACTTTACCTGATGAAAACTTGGACTTGGACTTGGACGTGGAGTTTCCCGAGTGGATGACCCAGGGTGATCAAGAGTTGCTTAAAGCCAAGCCACACCGTGCAGACGCTGTTGTTGCACTCGATGGAAGTGGTCACTATCGCTCTATCACTGATGCTGTTAATGCCGCTCCGGCGTATAGTCAAAGGAGGTACATTATTTACGTGAAAAAGGGTCTCTACAAGGAGAACATTGACATGAAGAGGAAAATGACCAACATAATGCTCGTCGGGGATGGTATTGGCCAAACCATTATCACAAGCAACAGGAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACGCTTGCTGTGTCCGGAAAGGGTTTCATTGCAAGGGACATGTCATTCAGGAACACGGCTGGGCCAGTGAATCATCAAGCGGTGGCACTGCGTGTGGATTCAGACCAATCAGCCTTCTATAGGTGCAGCGTGGAAGGGCACCAAGACACCCTCTACGCTCACTCCCTGCGACAGTTCTATCGTGAATGCGAAATCTATGGCACCATAGATTTCATTTTTGGGAACGGTGCTGCAGTGTTGCAAAATTGCAAAATATACACCAGGGTCCCACTCCCCTTGCAGAAGGTTACTATCACGGCCCAGGGCAGAAAAAGCCCACACCAGACCACTGGCTTCACCATCCAGGATAGTTACATTCTGGCCACCCAGCCCACGTATTTGGGCCGCCCCTGGAAGCAATACTCTAGGACAGTTTACATCAACACCTACATGAGTGGCCTCGTCCAGCCCAGAGGCTGGCTTGAGTGGTTTGGAAACTTTGCTCTGAACACATTGTGGTACGGTGAGTACAGAAATTATGGGCCTGGTTCATCACTTGCTGGTAGGATCAGATGGCCCGGTTATCATGTCATTAAAGATGCTTCCACTGCTAGTTTTTTCACTGTTCAGCGATTCATTAATGGGGACGCATGGTTGCCCAGGACAGGTGTCAACATTTTGTCCAACTATTCGTCTCTTGCATCCGCCGATACCATTTGCAACCTCGCACCTTATCCAACATTTTGCAAATCGAATTCACCCTCTAACGGCCAAGGCAGCATACACGAATATGGCCGGTTTTTCGCAGGTAGATCCATGTCATCATCAAAGGAGTTTGTCTCACTAGTCTCTAAATACCTTAAATCTCCTTCCAACTTCTCAAACTCTACCATCCTAGCCCTTCAAGATTGTCACCTTCTAGGTGACCTTAATAATGCATTTTGGCATAAGACCCTTAAAAAAATCAATTTCACAAACACCCTCAGTAGCTCAGAGGCTGAAAAGTTTCACACTTTGCTTAGTGCTACACTGACAAACTACGACACGTGCCTAAACAGCCTTCGTGAAACCACTGCAAGTCCTGACGATGTCCTACTTACCTATCTTTCCAATGGAACCAAGTGTTATAGCGTATCTCTTGCAATCTTCAAGAGGGGTTGGGTAGACAGTGCTAACAAAGAGAGAAAGCTTACAGAAACAGATTATCAAAGGTGGGAACGGAAGGTGTACGAGCTTATCAGAATGAGGGGAAGAAAACTGCTTGAGTTGGTTCCAGACAATGTTGTTGTGAGCCAAAGGGTGGTGGTGAAGCCGGATGGGTCTGGAAACTACACGAGTATCAATGATGCAGTGGCTGCAGCTCCAAATAACACGGGGTGGCAACGGGTTTTTCCTGATTCACGTTGTGGCTGGAGTTATCTGATGATGATAGGAGATGGAATTAACCACACCGTAATCACGGGTAATCGCAGTGTCGTTGATGGTTGGACCACCTTCAATTCTGCAACATTTGCGGTGGTGCCACAAGGTTTTGTGGCAGTAAACATAACATTTAGCAACAGAGCTGGAGCAATAAAACACCAAGCAGTAGCACTCCGGAGCGGGGCAGACATGTCTGCATTTTACAATTGTAGTTTTGAAGGATACCAAGACACCTTATACACTCATTCGCTTAGGCAATTTTATAGAAACTGTGACATTTATGGGACGGTGGACTTCGTATTTGGTAACGCAGCAGTTGTCTTGCAAGACTGTAACATACACCCAAGACTCCCACTGAAGAATCAATTCAATGCAATTACCGCACAGGGAAGAACGGACATTAACCAAAACACAGGCACAGCCATACACAATTGCAGCATAACCGCGGCAAGTGACTTAGCAACTAGTAATGCCACCATAGAGACATACCTGGGAAGACCATGGAAGCAATATTCTCGAACCCTTTATATTCAGTCTTTCATGGACAGCTTGATCAACCCAGCGGGGTGGTTAGCCTGGTCAGGGGACTTTGCTTTGGACACCCTTTATTATACTGAATTTGATAATAAAGGGCCTGGATCTAACACTAGTAATAGGGTTACTTGGCCAGGCTACCATGTCATCAATGCCATAGATGCTGTTAATTTTACAGTTGCTACTTTCATTCTTGGAGCAACTTGGCTGCCTACCACTGGAGTACCTTACTATGCTAATTTACTT 3172 0.4678 MMALLSFVFILMVLPWLEGVSYEGIPSEVETQDMQALIAQACMDIENQNSCLTNIHNELTKIGPPSPSAVMSAALKATLNEARVAIDNITKVTTLSVSYREQQAIEDCKELLDFSVSELAWSMGEMRRIRGGDSNVQQEGNLEAWLSAALSNQDTCLEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHTLPFKPPRNKTTTLPDENLDLDLDVEFPEWMTQGDQELLKAKPHRADAVVALDGSGHYRSITDAVNAAPAYSQRRYIIYVKKGLYKENIDMKRKMTNIMLVGDGIGQTIITSNRNFMQGWTTFRTATLAVSGKGFIARDMSFRNTAGPVNHQAVALRVDSDQSAFYRCSVEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQTTGFTIQDSYILATQPTYLGRPWKQYSRTVYINTYMSGLVQPRGWLEWFGNFALNTLWYGEYRNYGPGSSLAGRIRWPGYHVIKDASTASFFTVQRFINGDAWLPRTGVNILSNYSSLASADTICNLAPYPTFCKSNSPSNGQGSIHEYGRFFAGRSMSSSKEFVSLVSKYLKSPSNFSNSTILALQDCHLLGDLNNAFWHKTLKKINFTNTLSSSEAEKFHTLLSATLTNYDTCLNSLRETTASPDDVLLTYLSNGTKCYSVSLAIFKRGWVDSANKERKLTETDYQRWERKVYELIRMRGRKLLELVPDNVVVSQRVVVKPDGSGNYTSINDAVAAAPNNTGWQRVFPDSRCGWSYLMMIGDGINHTVITGNRSVVDGWTTFNSATFAVVPQGFVAVNITFSNRAGAIKHQAVALRSGADMSAFYNCSFEGYQDTLYTHSLRQFYRNCDIYGTVDFVFGNAAVVLQDCNIHPRLPLKNQFNAITAQGRTDINQNTGTAIHNCSITAASDLATSNATIETYLGRPWKQYSRTLYIQSFMDSLINPAGWLAWSGDFALDTLYYTEFDNKGPGSNTSNRVTWPGYHVINAIDAVNFTVATFILGATWLPTTGVPYYANLL 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03046 1046 Gene3D Invertase/pectin methylesterase inhibitor family protein 546 697 IPR035513 -
Pste5g03046 1046 SUPERFAMILY Pectin lyase-like 238 539 IPR011050 -
Pste5g03046 1046 Coils Coil 700 720 - -
Pste5g03046 1046 Gene3D - 739 1045 IPR012334 -
Pste5g03046 1046 Gene3D - 235 542 IPR012334 -
Pste5g03046 1046 ProSitePatterns Pectinesterase signature 2. 879 888 IPR033131 -
Pste5g03046 1046 SUPERFAMILY Pectin lyase-like 742 1043 IPR011050 -
Pste5g03046 1046 Pfam Pectinesterase 240 528 IPR000070 GO:0030599|GO:0042545
Pste5g03046 1046 Pfam Pectinesterase 746 1030 IPR000070 GO:0030599|GO:0042545
Pste5g03046 1046 FunFam Pectinesterase 35 194 - -
Pste5g03046 1046 CDD PMEI-like_3 550 699 - -
Pste5g03046 1046 CDD PMEI-like_4 51 192 - -
Pste5g03046 1046 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 549 697 IPR035513 -
Pste5g03046 1046 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 193 IPR035513 -
Pste5g03046 1046 FunFam Pectinesterase 234 542 - -
Pste5g03046 1046 Pfam Plant invertase/pectin methylesterase inhibitor 37 188 IPR006501 GO:0004857
Pste5g03046 1046 Pfam Plant invertase/pectin methylesterase inhibitor 549 694 IPR006501 GO:0004857
Pste5g03046 1046 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
Pste5g03046 1046 FunFam Pectinesterase 739 1045 - -
Pste5g03046 1046 PANTHER PECTINESTERASE 13 532 - -
Pste5g03046 1046 NCBIfam pectinesterase inhibitor domain 4 193 IPR006501 GO:0004857
Pste5g03046 1046 SMART PMEI_2 33 188 IPR006501 GO:0004857
Pste5g03046 1046 SMART PMEI_2 543 694 IPR006501 GO:0004857
Pste5g03046 1046 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03046 Pste-Chr5 23551800 23561142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03046 5 536 Carbohydrate Esterase AT3G05620 62.088 0.0 684