Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03038 TAAATTCTAAGATTCTAAGCTTTCTGATTCAGAAAATTGTCCTTATGTTCAGTCACGGCATCCCCCAACTTGGTTCACGCTTCATTTTTATTTGATAAGGAAGTATGTAGGAAAAGGCAAAGATACAAATAAAAAAAATTAAAAGGGTTCCTTCCTATGGGCTATTATTCTACTCAACATAATATACCTTAACGGGAAAACCACAAAAAGTGTCCTGTGGGGAATAACGTTGTCGAATTGATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCGTTTTCAATGAAGAAAGCAAGAAAGAATGGGAAATGTGAAGGGAGGGAAGCTGCTGAAGCAATAGCAAAGGAAGCTAAGAAGAGTGACATGATGTTGTGTAGCTCTGGCATTGTTCATGTGGATGGTTCCAACAACTTTGCCTCTGTTTTCTCCAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCATAGTATGGGAGGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGGCATGGTCCATGGGGTCACTTTGTGGCCAAAAAAGGTGAGCTCATTGTCATAGCAAATGTCGGTGACTCTCGTGCTGTGTTGGCTACAACATTAGAGGATGGAAGTGTGGTAGCAGTTCAACTAACTGTAGATTTCAAGCCCAATTTACCCCAGGAGGCGGAGAGAATAATTCAATGCCAGGGGCGTGTGTTCTGCTTAGAGGATGAGCCAGGGGTGCATAGAATGTGGTTACCGGATGAAGAGTCTCCAGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATTAAAGGGCATGGTCTTATTTCAGTGCCTGAGGTGACCCAGAGAAATATAAGTAGTAGAGATCAGTTTGTTGTGCTAGCCACTGATGGGGTTTGGGATGTAATATCAAATAAAGAAGCAGTGGATATCGTATCTTCAACAACGGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCCGTGCATGCATGGAAACGCAAGAGACGTGGCATTGCCGTGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCGCTTTCAATTTCATCAGAGCAAGTTAGCCATGTTGTCGCCTTAAAATAGATTATCGTGTAGTGAAGTCGTAATTGAGGATGTTGGGTTGATGTAGGCCTGATCCAATTAGCATAAATTGATTACAAGTGCATGGTATTCTGTTTACTTAGTTAATACACATACACCTTTAGCCATCATGTCTACCATCAAAATCACCTCAAACAACCTAAAATACCCACAAGACTATAAAAGCTTCTACAGGAATGGAATGTGGATAGAGATGAACGTGAAGTTATTGGATACACGAACACGGCAGAAGGTGATCTTTTGTAGGCAGAACACGAACTAAAATGATGGAGAGTACCCTCATCTAATCACACTCATGATCACTTAAGTCGTCACTACAAATATCAGCAAGTTGTACGGACAACTAGTATTAGATTCATAATTCAATAATTTGTTAAACATATATAATTAAAATGTGTTTAAATTAATGTTATCAACAAATGGTGAATAAAACAAAATCAATACCTTATT 1593 0.4036 MGHFSSMFNGLARSFSMKKARKNGKCEGREAAEAIAKEAKKSDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKKGELIVIANVGDSRAVLATTLEDGSVVAVQLTVDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRMWLPDEESPGLAMSRAFGDYCIKGHGLISVPEVTQRNISSRDQFVVLATDGVWDVISNKEAVDIVSSTTDKAKAAKRLVECAVHAWKRKRRGIAVDDISAICLFFHSSLSISSEQVSHVVALK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03038 294 SMART PP2C_4 51 274 IPR001932 -
Pste5g03038 294 Pfam Protein phosphatase 2C 110 254 IPR001932 -
Pste5g03038 294 Gene3D - 107 279 IPR036457 -
Pste5g03038 294 Gene3D - 49 106 IPR036457 -
Pste5g03038 294 CDD PP2Cc 59 276 IPR001932 -
Pste5g03038 294 PANTHER PROTEIN PHOSPHATASE 112 274 IPR015655 GO:0004722|GO:0006470
Pste5g03038 294 SUPERFAMILY PP2C-like 56 277 IPR036457 -
Pste5g03038 294 ProSiteProfiles PPM-type phosphatase domain profile. 11 276 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03038 Pste-Chr5 23430891 23433524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03038 105 277 PP2C-type Phosphatase Gene Family AT3G05640 78.035 2.87e-98 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03038 5 23430891 23433524 Pste5g03038 5 23430891 23433524 ECH
Pste5g03038 5 23430891 23433524 Pste4g01223 4 8970234 8973569 PCT