Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03037 GCCTTTCTCAACTACTGCTGCCACCATTTGGCTTCTGCTCCAAACAGAAAACAAGTTGATTCACAACACCACAAAGGCCATCTTGGATTTTTTCAGAAAACTCGATTCAATACAGGTGCTATGGAACTCCTTCAGAGAACTGACAATGGCAGCAACCACCAGAAGAAGATGGCTAATATAACCAAAGGCCAGTGGAGTGCTAAAGAAGACAAGGCCTTGTTTCAATTGGTGAAATGTTTTGGGAAGCAAACATGGTCTCTCATTGCTACGGTGCTGAATGAAAGGATTAGTAAACACTGCAGGGATCGATGGCACTACCATATCAAACCAAAAATTATGGGTGGGCGTCAGTTTAGGAATGGGAACGTGCCATATGGCGGAGGCTATGTGCCTGTGATGGTGAATGTTGTGGAAAACAACCCAATGGATAATGGGCTTGCAATGGAGATGGAACTAGACCTAAACAAGGAAATAGATGTCATGGAACTTGGTCAATATGAAAGCTTAAGATGCATGGTGTTGGCT 525 0.4362 AFLNYCCHHLASAPNRKQVDSQHHKGHLGFFQKTRFNTGAMELLQRTDNGSNHQKKMANITKGQWSAKEDKALFQLVKCFGKQTWSLIATVLNERISKHCRDRWHYHIKPKIMGGRQFRNGNVPYGGGYVPVMVNVVENNPMDNGLAMEMELDLNKEIDVMELGQYESLRCMVLA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03037 175 FunFam Transcriptional activator Myb isoform A 61 113 - -
Pste5g03037 175 CDD SANT 65 108 IPR001005 -
Pste5g03037 175 Gene3D - 53 113 - -
Pste5g03037 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 112 IPR017930 -
Pste5g03037 175 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
Pste5g03037 175 ProSiteProfiles Myb-like domain profile. 57 108 IPR001005 -
Pste5g03037 175 SMART sant 61 110 IPR001005 -
Pste5g03037 175 PANTHER MYB PROTEIN-RELATED 62 113 - -
Pste5g03037 175 Pfam Myb-like DNA-binding domain 65 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03037 Pste-Chr5 23409211 23412204 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03037 54 112 MYB Transcription Factor Family AT4G18770 50.847 1.54e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste5g03037 Myb_DNA-bind_6 1.9e-12 CL0123