Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03035 AAGCATTTCTCAACTACTGCTGCCACCATATGGCTTCTGCTCCAAACAGAAAACAAGTTGATCCCAAGCATAGCAATCACAACACCACAAAGGCCATCTTGGATTTTTTTCAGAAAACTCGATTCAATACAGGTGCTATGGAACTCCTTCAGAGAACTGACAATAGCAGCAACCACCAGAAGAAGATGGCTAACATAACCAAAGGCCAGTGGAGTGCTAAAGAAGACAAGGCCTTGTTTCAATTGGTGAAATGTTTTGGGAAGCAAACATGGTCTCTCATTGCTACGGTGCTGAATGAAAGGATTAGTAAACACTGCAGGGATCGATGGCACTACCATATCAAACCAAAAATTATGGGTATGCGTCAGTTTAGGAATGGGAACGTGCCATATGGCGGAGGCTATGTGCCTGTGATGGTGAACGTTGTGGAAAACAACCCAATGGATAATGGGCTTGCAATGGAGATGGAACTAGACCTAAACAAGGAAATAGATGTCATGGAACTTGCTCAATAGGAAAGCTTAAGATGCATGGTGTTGGCTCTAATAAAACAATCAACTCTTATTATAAGTTCCTTTCTTCTGTTATATTTTGGTTATAATTTTCTTCGG 611 0.4124 MASAPNRKQVDPKHSNHNTTKAILDFFQKTRFNTGAMELLQRTDNSSNHQKKMANITKGQWSAKEDKALFQLVKCFGKQTWSLIATVLNERISKHCRDRWHYHIKPKIMGMRQFRNGNVPYGGGYVPVMVNVVENNPMDNGLAMEMELDLNKEIDVMELAQ 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03035 161 Pfam Myb-like DNA-binding domain 61 108 - -
Pste5g03035 161 CDD SANT 61 104 IPR001005 -
Pste5g03035 161 SMART sant 57 106 IPR001005 -
Pste5g03035 161 ProSiteProfiles Myb-like domain profile. 53 104 IPR001005 -
Pste5g03035 161 MobiDBLite consensus disorder prediction 1 20 - -
Pste5g03035 161 SUPERFAMILY Homeodomain-like 55 108 IPR009057 -
Pste5g03035 161 Gene3D - 48 109 - -
Pste5g03035 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 108 IPR017930 -
Pste5g03035 161 PANTHER MYB PROTEIN-RELATED 58 108 - -
Pste5g03035 161 FunFam Transcriptional activator Myb isoform A 57 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03035 Pste-Chr5 23372288 23377753 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03035 50 108 MYB Transcription Factor Family AT4G18770 50.847 6.24e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste5g03035 Myb_DNA-bind_6 2e-12 CL0123