Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03033 ATGACTACTCCTTCAAAAGAAGCCTTTCTCAACTACTGCTGCCACCATATGGCTTGTGCTCCAAACCGAAAACAAGTTGATACCAAGCATAGCAGCCACAACACCACAAAGGCCATATTGGATTTTTTTCAGAAAACTCGATTCAATACAGGTGCTATGGCACCCCTTCAGAAGGGAACTGACAATAGCAGCAACCACCAGAAGAAGATGGCTAAGATAACCAAAGGCCAGTGGAGTGCTAAAGAAGACAAGGCCTTGTTTCAATTGGTGAAATGTTTTGGGAAGCAAACATGGTCTCTCATTGCTACGGGTATGCGTCAGTTTAGGAATGGGAACGTGCCATATGGCGGAGGCTATGTGCCTGTGATGGTGAACGTTGTGGAAAACAACCCAATGGATAATGGGCTTGCAATGGAGATGGAACTAGACCTAAACAAGGAAATAGATGTCATGGAACTTGCTCAATAG 468 0.4466 MTTPSKEAFLNYCCHHMACAPNRKQVDTKHSSHNTTKAILDFFQKTRFNTGAMAPLQKGTDNSSNHQKKMAKITKGQWSAKEDKALFQLVKCFGKQTWSLIATGMRQFRNGNVPYGGGYVPVMVNVVENNPMDNGLAMEMELDLNKEIDVMELAQ 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03033 155 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 105 IPR017930 -
Pste5g03033 155 ProSiteProfiles Myb-like domain profile. 70 112 IPR001005 -
Pste5g03033 155 Gene3D - 65 113 - -
Pste5g03033 155 SUPERFAMILY Homeodomain-like 72 104 IPR009057 -
Pste5g03033 155 CDD SANT 78 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03033 Pste-Chr5 23349245 23352376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03033 67 102 MYB Transcription Factor Family AT4G18770 47.222 9.41e-06 42.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste5g03033 None None None