Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03022 AAGTTTCTTCTGATATATCTCCCACCAAAGATAAAGGCATGAAGGAGAAGATATTTTTTTCTCTCTCTTCTTGGCCTGGTTAATTTACCTTTTTATCCCCCTATTCATTTATATTGCCCAGACTCATGGGCTTGTGTTGATCGCAGTTAGATTTTTAAGCGGGTGAAGAAGGGCTTCACCTTTCTCTGCCGTTCAATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTGCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCCATGAGGTGGCACCCGGACAGGTGGACTCGGAATCCCTCAACCGCCGGAGAAGCCAAGCGCCGCTTTCAGCAAATCCAAGAAGCCTACTCTGTTCTTTCGGATCAGTCCAAAAGGTCAATGTATGATGCGGGGATGTACGATCCTTTGGAGGAAGACGACCAAGTCCGTATCGTAGTTTCCTTTCATTTTCATTTTCATTTTAAGTTGCACAGCCTCAGACAAGGCAGGCCTTTTCCCGTAAACAAGCCGAGCTAA 558 0.4785 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDRWTRNPSTAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGMYDPLEEDDQVRIVVSFHFHFHFKLHSLRQGRPFPVNKPS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03022 120 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pste5g03022 120 PANTHER PUTATIVE, EXPRESSED-RELATED 7 90 - -
Pste5g03022 120 Pfam DnaJ domain 13 78 IPR001623 -
Pste5g03022 120 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pste5g03022 120 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pste5g03022 120 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pste5g03022 120 PRINTS DnaJ domain signature 73 92 IPR001623 -
Pste5g03022 120 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pste5g03022 120 SMART dnaj_3 11 73 IPR001623 -
Pste5g03022 120 Gene3D DnaJ domain 2 98 IPR036869 -
Pste5g03022 120 CDD DnaJ 12 70 IPR001623 -
Pste5g03022 120 SUPERFAMILY Chaperone J-domain 12 103 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03022 Pste-Chr5 23247274 23248011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03022 12 79 C2H2 Transcription Factor Family AT1G74250 42.029 2.08e-13 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03022 5 23247274 23248011 Pste5g03022 5 23247274 23248011 ECH