Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03020 CAATCCCAAAAAGATGGGGATGAAAGAGGTGAACAGAAGTGGAGACGTGAAGATTCACAACTATCGGAGACCATCCGCATCATTGGAAATTATAGGTCTCTACACATTTGGACTGGTGAACTGTTTAAGATGCCACATTTCGCAGATTGTGTTGGAAAATTGGTACGAGAGGAATTGGAACGCCAACTTGCAAGACAAAGTAATAATGAGACTGGAAAATCGGGAACCAAACCCCTGCAGCTGGTTTTTAAGAAAGAATTGCCTGCTACAATCTTTACCAAATCGAAGATTAAAGCAAAAGACGACACTTGTGTTGAGATTGCTCTTTACGATGCAAAATCTAGGTGTATAGTTGCTGAGGGTTCACTGTCTTCGATGAAGATAGAGATTTGTGTCCTTAATGGTGAGTTCGGTTCAAATGGCAGTGAAGATTGGAGTACAGCTGAATTCACCGCCAAAATCTTACGTCAAAGAGACAATAAAGGGCTCTTACTTAAAGGAGATAGGGTTATAACACTTACAAATGGAGTTGGTTATATCTCCAACCTTGATTTCACTGACAACTCAAGGTGGATAAGAACCGGACACTTCAGGTTAGGAGCCAAGCCTGTACAATCAAATTTGACAGACGCAATTAGCGTCAGGAAGGTAGAAGTAATCCTTTTATTGTCAGAGAAAAAACACGACACTCCATCCCTCAGAGATCCAATATGGCGTTTGAAACATATATCAACAAAGGGGCCAAGTTTTCATCAGTTGTCTGATTTGTACGGGATAAACACTGTTGGGGATCTGTTGAAGGAGCACGAAACTAATCCTTTATCTTTGCAAGAGAAATTTGGCAAGATTCCAAAAGGAAACAGGAAGAAATTATTAAACATGCCCAGAAAGCAAAGCATGCTAAGACTTGAATCTTACAAAAATATGAAGGATCTGTCGTTAGAGACAATAAAACATGATTCAGTGAAAACATTGATACAATACGGCCCTCCAACTCAAGATCTACAAAACACTGGCTTCCCAATTGCTCAAGAAGAAATTTATAGGCTAATGGAGCCACCAAACGGATCAGGATGGGGGAAGTTTGCTGATGGAAACATATGGCCTGTTGAGGCATCACAGTTTGATCACAATGCAATATGCTCTACTGCACCTGACATAATTCCTTATTATTTCCCTATGCTTGATGAAGCTGAATGTAGCAATCATCCCTCTTTCCCCAACTCTTCTCTGTATACATCAAACAAAGGGAAAGGCAAGATGCTTTGACGTTAAGATTCTAAGGGCTTTAGTTTCAAATGGGTCACAATGGCCGCAGCCAAAGCCAAAACCTTTTTTCGCCGTCAGTGTTGACTTCAATTTTCTCAATTTGTATTTTTTCAACGTGTAAAAAAGACTCTACAAAGGATGGACCCGATTATGTATTTTTTTTATTTAAAATATGTGAGAATTGTTAGATAA 1461 0.3949 QSQKDGDERGEQKWRREDSQLSETIRIIGNYRSLHIWTGELFKMPHFADCVGKLVREELERQLARQSNNETGKSGTKPLQLVFKKELPATIFTKSKIKAKDDTCVEIALYDAKSRCIVAEGSLSSMKIEICVLNGEFGSNGSEDWSTAEFTAKILRQRDNKGLLLKGDRVITLTNGVGYISNLDFTDNSRWIRTGHFRLGAKPVQSNLTDAISVRKVEVILLLSEKKHDTPSLRDPIWRLKHISTKGPSFHQLSDLYGINTVGDLLKEHETNPLSLQEKFGKIPKGNRKKLLNMPRKQSMLRLESYKNMKDLSLETIKHDSVKTLIQYGPPTQDLQNTGFPIAQEEIYRLMEPPNGSGWGKFADGNIWPVEASQFDHNAICSTAPDIIPYYFPMLDEAECSNHPSFPNSSLYTSNKGKGKML 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03020 422 Pfam Calmodulin binding protein central domain 233 282 IPR046830 -
Pste5g03020 422 PANTHER OS02G0177800 PROTEIN 13 299 IPR012416 GO:0005516
Pste5g03020 422 Pfam Calmodulin binding protein-like N-terminal domain 79 208 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03020 Pste-Chr5 23219520 23223115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03020 53 267 Calmodulin-binding Proteins AT5G57580 37.768 2.94e-37 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03020 5 23219520 23223115 Pste5g03020 5 23219520 23223115 ECH