Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03018 CTCCCACTCCACCATAGCAGAACAGCTGCATTAAATAATGTAACTGGCCAGGGACTGAAGCTCCCTTGAACTGATCATGTACATGCTCAAACTCTTGTTAACCTTCTTCCTCACATGGACCTTTTCTCCCTCACTTTCCACCTCCATGACTGAGCTTGACACTCTCATGGCCATAAGAGACTCTCTAGACCCAGAGAACAATGTTTTGATATCATGGACCCTTCATTCAGACCCTTGTAGCAGTGCCTCTTTTGAGGGTGTGGCATGCAATGATAAAGGTCTTGTTACCAATATTTCACTCCAAGGAAAGGGTCTATCTGGAATGATACCTGAAGCTTTGGCTGGTCTCAAGAGCTTATCTGGTCTCTACCTTCACTTCAATGCCCTTAATGGGATATTACCAAAAGATATTGCCACTTTGACTGAGCTAACTGATTTGTATCTCAATGTCAATAACCTCTCTGGTGATATCCCTCATGAGATTGGCAATATGTCAAATCTTCAAGGGCTCACAGTTTTGCAGCTTTGTTATAACAAGTTTACTGGGAGTATTCCCACTGAGCTAGGAAGCTTAAAAAAGCTCAGTGTTGTTGCACTGCAATATAATCAATTAAATAGTGCTATTCCTGCGAGTTTGGGTGAAGTGGAGACATTGACACGATTGGATCTGAGCTTCAATAACCTTTTTGGTCCAATTCCAGTAACACTGGCTAATGCACCTAAGCTTGAGAGTCTAGATATTCGAAACAATTCCCTCTCAGGTCATGTCCCTACAGCTCTAAGAAGACTCAAAGATGGGTTTCAGTACATGAACAATCCAGGCTTGTGTGGGACTGAATTCTCCCATTTAGATTCTTGCAAATTAGTGAACAGTTCAGACCCAGTTAGACCTGAACCGTATGAACCTGGAGATATTTCCACCAAATTTGAGCCAAAACCTGAAAACTGTTGCAGTAAAAGGGCATGGAAATCTTCAAAAATTGGTGTGGTTTTTGCTGTGATTGGAGCTATTGTTGCTTCAACTGTTGCAGGTATGTTTCTGCTCTTATGGCACCGTAGGAAACAAAAAATTGGAAGTTCTGATAACCGGCTTAGTGCTAATCAGACCAAGCAAGTGTGGCAGAAAAATGTGACTCCTCTTATAAGTTTAGAGTATTCTAATGGATGGGATCCATTAGCAAAAGGTGGAAGTGGTTACTCACAGGAAGTTCTGGAGAGCTTTATGTTTAATCTTGAAGAAGTGGAACGTGCAACTAATGGCTTCTCAGAAGTGAATTTGTTGGGGAAGGGTAATTTTTCTGCTGTATACAGAGGGGTGCTGAGAGATGGTTCTGCTGTAACTATAAAGTGCATTGCTAAGACAAGCTGCAACTCTGATGAAGCTAAATTCTTGAAAGGTTTGAAGATATTGACCTCATTAAGGCATGAAAATTTGGTTCGCTTGAGAGGGTTTTGCTGTTCAAAAAGCCGTGGAGAATGTCTCCTCATTTATGAGTCTCTCTCAAATGGGAATTTGTTGCAGTATCTTGATGTTAAGAGAAACAGTGGGAGGGTGCTTGAGTGGTCCACTAGAGTGTTCATCCTTCGTGGTATTGCCAAAGGTATTGGTTATCTGCATAGGAAGAAAGGAAGCAAACATGGTGTAGTTCTTCACCAGAATATATCAGCTGAAAATACTCTTCTAGATGCTCGGTACAATGCCTTACTTGCAGATTCAGGATTGCACAAACTCCTTGCAGATGATGTTGTTTTTTCCGCCCTCAAAGCAAGTGCTGCCATGGGGTATCTGCCTCCAGAATACGCTAAAACGGGTCGTTTGACCGAAAAGAGTGATGTGTATGCATTTGGAGTCATAGCTTTCCAACTTCTCACTGGAAAATGTGATATCAGTAGATTGAATTGCCAATGGGTAGAAAGTGCAAGTTTGAAAGATATAGTTGATGAGAATCTTGAAGGGGTGTTCTCAGAATCTGAGGCAACCAAGCTAGGAAGACTTGCTATGCTTTGCATGCATGAATCTCCACATCTTCGACCATCTATGGACAATGTAATGATAGAACTGGGTGATATTCAGTAGCCGGTCCTCATATGTAGCATCATATTTTTTTCTTGTCTTTGTAGTTGGAGAAAGTAGAGATGTAAGCACTGTAAAATATTATGATTTCCTTAGAAGTAAACTGTTTGTTTATGTGTATTATGGAAAAATTCACATGTTAAATAGAGTGTTCATAGTACGGGTTGGAGTTTTTTACTGTATGGGTGACCCAACCCATTCAAATTTGTTCATGCATGGGTTAGATCAGATTTTGAATGTGTG 2317 0.4091 MYMLKLLLTFFLTWTFSPSLSTSMTELDTLMAIRDSLDPENNVLISWTLHSDPCSSASFEGVACNDKGLVTNISLQGKGLSGMIPEALAGLKSLSGLYLHFNALNGILPKDIATLTELTDLYLNVNNLSGDIPHEIGNMSNLQGLTVLQLCYNKFTGSIPTELGSLKKLSVVALQYNQLNSAIPASLGEVETLTRLDLSFNNLFGPIPVTLANAPKLESLDIRNNSLSGHVPTALRRLKDGFQYMNNPGLCGTEFSHLDSCKLVNSSDPVRPEPYEPGDISTKFEPKPENCCSKRAWKSSKIGVVFAVIGAIVASTVAGMFLLLWHRRKQKIGSSDNRLSANQTKQVWQKNVTPLISLEYSNGWDPLAKGGSGYSQEVLESFMFNLEEVERATNGFSEVNLLGKGNFSAVYRGVLRDGSAVTIKCIAKTSCNSDEAKFLKGLKILTSLRHENLVRLRGFCCSKSRGECLLIYESLSNGNLLQYLDVKRNSGRVLEWSTRVFILRGIAKGIGYLHRKKGSKHGVVLHQNISAENTLLDARYNALLADSGLHKLLADDVVFSALKASAAMGYLPPEYAKTGRLTEKSDVYAFGVIAFQLLTGKCDISRLNCQWVESASLKDIVDENLEGVFSESEATKLGRLAMLCMHESPHLRPSMDNVMIELGDIQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03018 666 FunFam Leucine-rich repeat receptor-like kinase 25 138 - -
Pste5g03018 666 Pfam Leucine Rich Repeat 216 235 IPR001611 GO:0005515
Pste5g03018 666 Gene3D Ribonuclease Inhibitor 143 261 IPR032675 -
Pste5g03018 666 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Pste5g03018 666 SUPERFAMILY Protein kinase-like (PK-like) 375 661 IPR011009 -
Pste5g03018 666 Gene3D Transferase(Phosphotransferase) domain 1 476 666 - -
Pste5g03018 666 ProSitePatterns Protein kinases ATP-binding region signature. 402 428 IPR017441 GO:0005524
Pste5g03018 666 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 662 - -
Pste5g03018 666 FunFam Protein NSP-INTERACTING KINASE 2 368 474 - -
Pste5g03018 666 Pfam Protein tyrosine and serine/threonine kinase 400 660 IPR001245 GO:0004672|GO:0006468
Pste5g03018 666 ProSiteProfiles Protein kinase domain profile. 396 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g03018 666 SUPERFAMILY L domain-like 23 239 - -
Pste5g03018 666 Gene3D Phosphorylase Kinase; domain 1 373 473 - -
Pste5g03018 666 Pfam Leucine rich repeat 71 128 IPR001611 GO:0005515
Pste5g03018 666 FunFam Protein NSP-INTERACTING KINASE 2 139 262 - -
Pste5g03018 666 CDD STKc_IRAK 402 665 - -
Pste5g03018 666 Gene3D Ribonuclease Inhibitor 23 142 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03018 Pste-Chr5 23206873 23210701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03018 4 509 Miscellaneous Gene Families AT4G22730 47.744 9.09e-160 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pste5g03018 PK_Tyr_Ser-Thr 6.9e-38 CL0016