Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03014 AAACAATGTCTCCATGCGCCACCGCTATGCTTCTGCTCCTAGCGATGGCCACCACCACCCACTCCACCTTCACCAAATCAAAGGAGTTACACATTCTTTATGCGGCCCAAGTCCAGATGGCCCGAGCCAGGACCTGGGCCTCTACCTCTGCAGGTTTGCAAGACCTTATCGATCCACCATGCGTGATAGCATTAAGAGACTGCATCAAGCTTTACAGCGAAGGTGAGTCTCGGCTTTCACGCATGGTGGACGACGTGAACAGCTACACCATGCATGATGCGCTCACGTGGGTGAGTTCGGTGATGACTAACCACAGGACTTGCATGGATGGTTTGCGGAGAAAAGGGTATGTATTAGAAGCTCGGATTTTGGGAAGAAACATGACCACCATGTTGAAGCAGGCACTTGCTGCTTATGCCAATAACATAGACAAAGTTCAAGAACTACCTCAGGAAACATTGTCAGAATCATCAACTAATGGTCTTTTAGCATCATGGAATAGTGAAACTTCTAATGCAGACTTCACAGTGGCAAAGGATGGTTCAGGTACTCACAAAACAATCTCTGAAGCAGTAAAAGCACTTGCTGCTAATAACCGTCCCTCAAGACAAGTCATATACGTAAAATCAGGGGTCTACAATGAGAAAGTGGATATTGGAGCCAATTTGAAGAATGTGATGCTTGTAGGAGATGGCATAGACAAAACTATTATCACTGGCAACAAAAATGCCAATCAGGGTGATTCAACTATAGGCTCAGCCACATTTGCTGGAGATGGATTTTGGGCAAGGGACATAACATTTGAGAACACAGCAGGGCCAGAGGGACACCAGGCAGTGGCATTAAGGGTCAGTGCAGACCTATCGGTCTTCTACAAATGCAGCTTCAAGGGTTACCAAGACACTCTTCTTGTGGACTCAAACAGACAATTTTTTAGAAACTGCCACATATATGGCACCATAGATTTCATATTTGGTGATGCCTCAGTGGTGTTCCAAAGCTGTGACATCCTCCTAAGGAAACCAATAAACAAGCAAGCCAACTACATCACAGCACAAGGAAGAGATGACCCTAACAAGCCCACAGGGATATCAATCCACAGTTGCCAGGTGAAGCCAGCAAATGACTTTTCCTCTTCTGGGGACTCTACCAACAACTTCCTAGGGAGGCCTTGGAAAAAGTACTCAAGAACAATGTTTATGAAGACTAATTTGGATGGTTTGATTGACCCAAAAGGGTGGAGTGAATGGAATGGAGACTTTGCACTTTCAACTTTGGACTATGGAGAGTATTTGAACACTGGCAGTGGTGCCTCTACACAGCACAGGGTCAACTGGCCTGGTTTCCATGTGTTGAGTAATGATAATGAGGCCACACCATTCAGTGTGAATCAGTTCTTGCAAGGGGAGAAGTGGATTCCAGCTACTGGTGTGCCATTCAGTTCTGGAATTTAG 1454 0.4574 MSPCATAMLLLLAMATTTHSTFTKSKELHILYAAQVQMARARTWASTSAGLQDLIDPPCVIALRDCIKLYSEGESRLSRMVDDVNSYTMHDALTWVSSVMTNHRTCMDGLRRKGYVLEARILGRNMTTMLKQALAAYANNIDKVQELPQETLSESSTNGLLASWNSETSNADFTVAKDGSGTHKTISEAVKALAANNRPSRQVIYVKSGVYNEKVDIGANLKNVMLVGDGIDKTIITGNKNANQGDSTIGSATFAGDGFWARDITFENTAGPEGHQAVALRVSADLSVFYKCSFKGYQDTLLVDSNRQFFRNCHIYGTIDFIFGDASVVFQSCDILLRKPINKQANYITAQGRDDPNKPTGISIHSCQVKPANDFSSSGDSTNNFLGRPWKKYSRTMFMKTNLDGLIDPKGWSEWNGDFALSTLDYGEYLNTGSGASTQHRVNWPGFHVLSNDNEATPFSVNQFLQGEKWIPATGVPFSSGI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03014 482 NCBIfam pectinesterase inhibitor domain 30 127 IPR006501 GO:0004857
Pste5g03014 482 PANTHER PECTINESTERASE 25 472 - -
Pste5g03014 482 Pfam Pectinesterase 172 468 IPR000070 GO:0030599|GO:0042545
Pste5g03014 482 Gene3D Invertase/pectin methylesterase inhibitor family protein 11 143 IPR035513 -
Pste5g03014 482 FunFam Pectinesterase 166 482 - -
Pste5g03014 482 Gene3D - 166 482 IPR012334 -
Pste5g03014 482 SUPERFAMILY Pectin lyase-like 168 481 IPR011050 -
Pste5g03014 482 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 116 IPR035513 -
Pste5g03014 482 ProSitePatterns Pectinesterase signature 2. 315 324 IPR033131 -
Pste5g03014 482 SMART PMEI_2 18 136 IPR006501 GO:0004857
Pste5g03014 482 Pfam Plant invertase/pectin methylesterase inhibitor 27 131 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03014 Pste-Chr5 23144942 23152042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03014 8 482 Carbohydrate Esterase AT3G60730 48.828 2.39e-180 513