Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03008 ATGTCTAACATCCCAACATCGCTCTCTGAGATTTGCTTAACCCAATTTCGCCTTGCCATGTTCGTGGATTCAATCTCCGGGCGCTTAATCCGGGTCTCGAAATGGATTTTTAAAAAATTTCATATTCGTATCCGACCCAGATATAATCGCCTGGATGACTGTGACAAGTCACAATCACCCATGGCAAAACTCCTCAAATGGGGACGGAAACTCACAGCGAGTACTAAATCTCGCTTGAGAATCAGGTCTGAGTCGGATTACACTCAATTAAAGTCCAAATCCGACCCGACCATCCCCAAAGGGCACCTCGCCGTCTATGTAGGACAAAAAGACGGCGAGGTGCACCGTGTTCTTGTACCGGTGATATACTTCAACCACCCTTTGTTTGGGGAATTGCTGAAGGAGGCGGAGGAAGAGTTTGGGTTCCACCATGAAGGAGGAATCACCATCCCGTGCCGGTTCACAGAGTTTGAACGGGTCAAGACCCGAATCGCATCCGGATCTCACCGGAGCACCCGTCCGAAAAGATTGGCATGGCACTAG 543 0.4936 MSNIPTSLSEICLTQFRLAMFVDSISGRLIRVSKWIFKKFHIRIRPRYNRLDDCDKSQSPMAKLLKWGRKLTASTKSRLRIRSESDYTQLKSKSDPTIPKGHLAVYVGQKDGEVHRVLVPVIYFNHPLFGELLKEAEEEFGFHHEGGITIPCRFTEFERVKTRIASGSHRSTRPKRLAWH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03008 180 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 82 159 IPR003676 GO:0009733
Pste5g03008 180 Pfam Auxin responsive protein 72 161 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03008 Pste-Chr5 23097575 23098384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03008 83 157 Calmodulin-binding Proteins AT3G43120 44.000 3.47e-16 70.5