Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste5g03003 | AAAATCTCTCACACTCATCATATTACACCATCATATCTTACTCTATCTATCATCTTTCATGGAGCAAAACATCTTAACATTTGTTCTTTTAGCACTTCCAATCTTGCTATTATTCTTCATCAAAAACAAAAAACCCTCAACCTTTCCACCAGGCCCTAGAGGCCTTCCCATAATTGGAAACCTTCACCAATTCGATAGCTCCACTATTTGTGTAAAACTCTATGAACTCTCAAAAAAGCATGGCCCCATCTTTTCCCTTCAACTTGGTTCAAGGCCAACCATTGTTATCTCATCACCAAAACTAGCCAAAGAAATAATGAAAACCCATGACCTAGAATTTTGTGGAAGACCCTCCCTCATAGGCTCAATGAAATTCTCATACAATGGCCTAGACATGGCCTTTTCACCTTATAGAGACTATTGGAGGCACACAAGAAAACTCTCCATAATCCACTTCCTTAGCCTCAAACGAGTCCTAATGTTCTCCTCAATAAGAAAACAAGAGGTGACCCAATTGGTCAAAAAAATAACCCAACATGGTTCCTCTTCAAAAGTCACAAACTTGCACGAGTTGCTCATGTGCCTCACTAGTGCCATAGTGTGTAGAACTGCCTTGGGGAGAAGGTTTGAAGAGGAAGGGGTTGAGACAAGTATGTTCCATGGCTTGCTTAAGGAAGCACAAGATTTGGTGGCTTCTAATTTTTACACTGACTATGTTCCCTTTGTTGGGGGCGTGGTTGATAAAATTAGTGGCTTGTTGGGTCGGCTTGAGAAAATATTTAAGGTTTTGGATGGGTTTTACCAAAATGTTATTGATGAACACCTTGACCCACAAAGGAAAATGCTCAGCAACGAAGAAGATATCATTGATGTCTTGCTTCAATTGAAGAATCATCGTTCCTTCTCCATGGATCTTACCCCGGATCACATCAAACCCTTGATGATGAATATAATTTTGGCAGGGACAGATACAATTGCAGCAGCAGTAGTGTGGGCCATGACAGCCCTAATGAAGAATGAGAGAGCAATGAAGAAAGGGCAAGAAGAGATTAGAAGCATGTTTGGAGGGAAAGATTTCATAGAGGAAGAAGACATTGAAAAGCTTCCATATTTGAAAGCAGTTATAAAAGAAACAATGAGATTGTACCCTCCACTGCCTCTACTTTTGCATAGAGAAACAATTAAGAAGTGCAACATTGGAGGGTATGAGATTCCTGATAAGACATTGGTGTATGTGAATGCTTGGGCAGTGCATAGGGATCCAGAGACTTGGAATGAGCCTGAAGAGTTTTACCCTGAGAGGTTTATGGATAGCAAAATTGACTTTAGGGGTTATGATTTTGAGTTGATTCCTTTTGGGACTGGAAGAAGGATTTGCCCTGGGATTCATATGGGTGTTATCACTGTGGAGGTTGTGCTTGCTAATCTTTTGTTTTCATTTGATTGGGAAATGCCTCATGGAATGAAGAGGGAAGACATTGACACTGATATGCTTCCTGGGGTTATCCAACACAAGAAAAATCCCCTTTGTCTTGTTGCTAAGAACTTTGTATCATCATCCAAAATGATATCACTTGTGTACATTCTCATAGCTCTTCTTCCTATGGTGGCATTGATCATCTTGAACAAACACACAGGCAAAAACAACCCTCTTCCACCTGGACCAAGAGGCCTTCCCATCATAGGCAACCTCCACCAACTAGACAACTCAAAACTCACTTCCCAACTGTGGCACTTCTCAAAGACCTATGGCCCACTTTTCTCCCTCAAAATTGGAAACAAACAAGCCATAGTTGTTTCCTCTCCAAAGCTAGCCAAAGTGGTTCTCAAAGACCATGACCTTGATGTGTGCACAAGACCCCCCTCAATTGGCCCTCTCAAACTAACCTACAATGGCTTAGAGTTAATCTTCTCTCCCTACTCTGAGCACTGGAAAGAACTTAGAAAAATCTGCGTGGTCCATTTATTCAGCTCCAAAAAAATCTCAACTTTCTCACATGTGAGAAAATCTGAGGTCAAAAAAATGTTGGAGATTCTCTCTGCCCACATGGCTAATTCCAAGGTCACAAACTTGAGTGAGGTTCTGATGGCGATTTCAAGCTCAATCATTTGTAGGGTCGCGTTTGGGAGGAAGTATGATGGGGAAGGTGCTGAGAAAAGCAGGTTTCATGGGTTGCTTAGTGAGTCACAGGCCATGTTGCTGTCTTTTTTTGTTGCGGATTTTATTCCTGTGTTGGGGTGGATTGATAGGGCTGTTGGCAAGGTTTCTAGCCTTGAAAAGACCTTTTTGGCCTTGGATGAGTTCTTCCAAGAAGTGGTTGATGACCACCTTGATCCTCATAGGGTGAAACAGAATGAAGATGATGAGGATATTGTTGATGTGTTGCTTCAGTTGAAGAAGCAGGGTCAATTGTCTATTGACCTCACCAATGATCAAATCAAAGCTGTTATCATGGACATACTTGTAGCAGGTACAGACACATCTGCAGCCACAGCAGTGTGGGTGATGACTGGACTGATGAAGAACCCAAGAGCAATGGCCAAAGCCCAAGAAGAAATCAGAAATCACTGTGGCAACGAAGAGTTCATAGAGGAAGAGGATGTGCAAAAGCTTGAATACCTAAAAGCAGTGATAAAAGAGGCACTAAGGCTTTATGCACCAACACCACTGATTCCAAGAGAAGCAATTAGAGGCTTCACACTAGAAGGGTATGAAATTAAGCCCAAGACAATAGTGTATGTGAATGGTTGGGCCATTCAGATGGACCCTGAGGCCTGGAAAGACCCAGAAGAGTTTTATCCAGAGAGGTTCTTGAACAGTGAGATTGATTTCAGGGGTCAGGATTTTGAGTTCATTCCATTTGGTGCAGGGAGAAGAATTTGCCCTGGGATATCACTAGGAATTGCCACAGTTGAACTCATTATTGCAAATCTTCTTAATTCATTCAATTGGGAAATGCCTGAAGGCATGAAAAGTGAACAAATTGACACTGATAGTTTGCCAGGGCTTGCCCGACACAAGAAGAATCATCTTTGCCTCGTTGCTAAGAAACATTTTTCAGTGTGATTTTAGAGTTTGGCCTCTGATTTTGATTGTAAAAAATGTATCACATGAGTTTGGAACATGACATGAGAATAATGCTATATCATAATATTGAGTTTGATATGAGAA | 3172 | 0.4142 | MEQNILTFVLLALPILLLFFIKNKKPSTFPPGPRGLPIIGNLHQFDSSTICVKLYELSKKHGPIFSLQLGSRPTIVISSPKLAKEIMKTHDLEFCGRPSLIGSMKFSYNGLDMAFSPYRDYWRHTRKLSIIHFLSLKRVLMFSSIRKQEVTQLVKKITQHGSSSKVTNLHELLMCLTSAIVCRTALGRRFEEEGVETSMFHGLLKEAQDLVASNFYTDYVPFVGGVVDKISGLLGRLEKIFKVLDGFYQNVIDEHLDPQRKMLSNEEDIIDVLLQLKNHRSFSMDLTPDHIKPLMMNIILAGTDTIAAAVVWAMTALMKNERAMKKGQEEIRSMFGGKDFIEEEDIEKLPYLKAVIKETMRLYPPLPLLLHRETIKKCNIGGYEIPDKTLVYVNAWAVHRDPETWNEPEEFYPERFMDSKIDFRGYDFELIPFGTGRRICPGIHMGVITVEVVLANLLFSFDWEMPHGMKREDIDTDMLPGVIQHKKNPLCLVAKNFVSSSKMISLVYILIALLPMVALIILNKHTGKNNPLPPGPRGLPIIGNLHQLDNSKLTSQLWHFSKTYGPLFSLKIGNKQAIVVSSPKLAKVVLKDHDLDVCTRPPSIGPLKLTYNGLELIFSPYSEHWKELRKICVVHLFSSKKISTFSHVRKSEVKKMLEILSAHMANSKVTNLSEVLMAISSSIICRVAFGRKYDGEGAEKSRFHGLLSESQAMLLSFFVADFIPVLGWIDRAVGKVSSLEKTFLALDEFFQEVVDDHLDPHRVKQNEDDEDIVDVLLQLKKQGQLSIDLTNDQIKAVIMDILVAGTDTSAATAVWVMTGLMKNPRAMAKAQEEIRNHCGNEEFIEEEDVQKLEYLKAVIKEALRLYAPTPLIPREAIRGFTLEGYEIKPKTIVYVNGWAIQMDPEAWKDPEEFYPERFLNSEIDFRGQDFEFIPFGAGRRICPGISLGIATVELIIANLLNSFNWEMPEGMKSEQIDTDSLPGLARHKKNHLCLVAKKHFSV | 1002 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste5g03003 | 1002 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste5g03003 | 1002 | Gene3D | Cytochrome P450 | 526 | 1000 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | Gene3D | Cytochrome P450 | 22 | 501 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PANTHER | CYTOCHROME P450 71B11-RELATED | 13 | 495 | - | - | |
| Pste5g03003 | 1002 | FunFam | Cytochrome P450 83B1 | 520 | 995 | - | - | |
| Pste5g03003 | 1002 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 935 | 944 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste5g03003 | 1002 | Pfam | Cytochrome P450 | 533 | 991 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | Pfam | Cytochrome P450 | 30 | 488 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | Coils | Coil | 827 | 847 | - | - | |
| Pste5g03003 | 1002 | FunFam | Cytochrome P450 83B1 | 17 | 493 | - | - | |
| Pste5g03003 | 1002 | SUPERFAMILY | Cytochrome P450 | 533 | 995 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste5g03003 | 1002 | CDD | CYP71-like | 563 | 992 | - | - | |
| Pste5g03003 | 1002 | CDD | CYP71-like | 60 | 490 | - | - | |
| Pste5g03003 | 1002 | SUPERFAMILY | Cytochrome P450 | 30 | 494 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste5g03003 | Pste-Chr5 | 23028558 | 23044055 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste5g03003 | 504 | 999 | Cytochrome P450 | AT4G31500 | 45.000 | 1.20e-152 | 460 |