Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02996 AATTTTTGTATCTCAGCTGCCAGGCGCCGTTTCCCTTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTCAAAAATCCAGTTTTTTCTCACTGTGATCATCTCCATCTTCATGCCTCACTCTTCTCCTTAACCATCACAATTCTTTCTCCTTAGCCCTTCCTCACTCCAACACAACATACCACACCCTAATTCAAATTACTATACCAAAAAACATGCTGGTTAAGGTTTCTTCTTCATCACATGTTCCTCGGTGGCTTCAAGTGCTTCTCACTGAGAAATTCTACAACGCTTGCATAATTCATGAAGAGGCAAAGAAGAATGAAAAGAACGTGTATTGTTTGGATTGTTGCATCAGTCTTTGCCCTCACTGCGTGTCCCCTCACACTCACAGCTCTCATAGACTCTTACAGATTAGAAGATATGTGTACCATGATGTTATAAGGCTGGATGACGCGGAAAAGTTAATTGACTGTGATGCTGTTCAATCTTACACAACAAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAAACAAGGAACTTCAGAGGCTCCGGCAATTCCTGCAGCACCTGTGACAGAAGCCTGCAAGACCCATACCACTTCTGCTCTCTTTCTTGCAAGACTAAATATATCATGAGAACAACGGGTTCGCTATGCGGTTATCTGTTGGAGTGTAACTACTTGCCGTTACCTGAACCGGACGACGGTTTGATGACCCCGGACACGGTACTCGAACCGGCCGGTTCGGTCCGGACGAGTTCCGGTTCGGGAGGGTACGGCGGCGGCGTGGATTGCCGGACCGCCTTGGCTTGCACCGCCACGACCGAGATTGTGAGGAAGAAGCGAACCGGCGCGGGCGGGGCTGGTTTCCGGCAACCGTGCCGCCCGGCGTGCTCGCCGGTGTCGGAAATCTCGGCCGGGCTAATGAACCGGCGGAAGGGGAACCCCCAGCGGGCCCCACTCTATTGAAAGGAAAGAACTTGCAAGAGGGTGAGAGGAGGTTGTTTGAAATGAGAGAGAGAAAGG 1035 0.4947 MLVKVSSSSHVPRWLQVLLTEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCVSPHTHSSHRLLQIRRYVYHDVIRLDDAEKLIDCDAVQSYTTNSAKVVFLNQRPQTRNFRGSGNSCSTCDRSLQDPYHFCSLSCKTKYIMRTTGSLCGYLLECNYLPLPEPDDGLMTPDTVLEPAGSVRTSSGSGGYGGGVDCRTALACTATTEIVRKKRTGAGGAGFRQPCRPACSPVSEISAGLMNRRKGNPQRAPLY 253
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02996 253 ProSiteProfiles Zinc finger B-box type profile. 22 67 IPR000315 GO:0008270
Pste5g02996 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 252 - -
Pste5g02996 253 CDD Bbox2 27 67 - -
Pste5g02996 253 Pfam PLATZ transcription factor 68 138 IPR006734 -
Pste5g02996 253 SUPERFAMILY B-box zinc-binding domain 25 71 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste5g02996 Pste-Chr5 22885466 22887314 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pste5g02996 PLATZ 3.9e-27 No_clan