Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02989 ATGAAGGCTGTGCCCCTACCCTTTCAGGAATTTAGAGGGAACGGGGTGTTGGATTTTGGTTCTGGTGGTGGTGGTGCTGTTGCTGTTCCAGATTCGTTGTTTTGTCCACAGCAAGAGCAATTTTTGCAAAGGTGGAACACCAACAAGGAAAACTGTTGCTATGTGGGCATTGAGCCCTCTTTTGATTTGGACCTCAAAAGGAAAACTTGTAGCCCTCCCACATCCTCCTCTACACTGTCTTCCTCACGCAGCGGCGGCCGCGGCGGAGGAGGCTGCGGCTCCACCGATAGTACCACCGCCGCGGCCACGGCGGGTGAGAAGGAGAACAACCCTCCTCAAGCAGGGTTAGAGGTTGGACAGGGAAGATGTGGACTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGGCACCAGGTCAAGATAATTCCATTCTTAAATTGATTATGGGGGACATTGAGGACCCTTCTATGGTATTAACCAAGCTTTTGCAGGGTGGAAGTGGCTCTCAGGATGTTGAATTCAATGGTTTTAGTTTGGTGGATCAAAGTTCTGTTCTTGACCCTATTACTAGTGTTAATTTTGTGAGCAGCATTGACCCTTCTGGTGCTGGGAATTGTTCTGATTTCCCTTTCAATTCCCACAATAATGTTAGCCCCAATGTTAGAAGAGTTGGTTCTGGTGTGAATCCAAACCCTGGTTTCCCTGCTTCTGGTAGTAATCTCCCATCAGTTTCACTCCCTCAGGGTGTGTTTCAGCCACAACAGCAGCAGCATCAAGCAATAGAGCCTCTGGAAGAGAAGCTACAAGCTCTCAATCCCCAGTTCATTTTGAATCAAAATCAGTCTCAGTTTATGCCAAACCCTGGTTTGGTTTTGCCTTTGACATATGGCCAGCTGCAAGAACATCATCAGCTTCTTGCCCAACCTCCAGCGAAACGCTTGAATTGTGGCCCAAATTATCAGGTTCCAAAGGCACCCTTTTTGGACTCTGGCCAAGAGCTGTTACTTCGGAGGCAGCAACAGCAGCTTCAACTGCTTCCTCACCATCTGCTGCAGAGGCCATCCATTGTGGTGGCACCGAAGCAGAAAATGGTGAACCCTGGCGGCAGCGAAGACTTGGCAACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAAGCTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCTCCCATTGGGAAGCCTTTTCAAAGGGCTGCTTTTTATTTCAAGGAGGCCTTGCAATTCCTTCTCCATCCAAATGCCAATAACAGTTCTTTGACCTTCTCACCCACTGGCCTTTTGCTCAAGATTGGTGCTTACAAGTCATTCTCAGAAATCTCACCAGTTCTGCAGTTTGCCAATTTTACTTGCAACCAAGCACTGCTTGAAGCTGTGGAAGGATTTGATCGCATTCACATAATAGACTTTGATATTGGGTTTGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTCAGGAATGGCGGTGCACCTGAACTCAAGATCACTGCATTTGTGTCTCCCTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAGGAGAATTTGAAGCAATATGCTGGGGAGATTAACATGTCCTTTGAGCTTGAGATACTGAGCCTTGAGTCTTTAAATTCTGCTTCCTGGCCCCAGCCACTTCGTGACTGCGAAGCTGTAGTGGTTAACATGCCTATTGGCTCTTTCTCAAATTACCCATCATATCTTCCATTGGTCCTTCGCTTTGTGAAGCAGCTCATGCCAAAAATTGTGGTTACATTGGATAGAAGTTGTGATAGAACTGATGCACCATTTCCTCAACATCTGATTTTTGCACTTCAGTTTTATTCGGGTCTGCTTGAGTCACTTGATGCTGCTAATGTTCACCCAGATATCCTTCAGATGATTGAGAAGTATTATCTTCAACCAGCAATGGAGAAGCTTGTTTTGGGTCGACATGGTTTGCAGGAAAGAACACTTGCTTGGAAAAACCTTCTCTTGTCATCTGGGTTTTCACCATTGACATTTAGTAACTTTACATTGTCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCTGGTAAGGGATTCCATGTTGAGAAGAGGCAGTCTTCCCTTGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACTTGGAGATGCTGA 2220 0.468 MKAVPLPFQEFRGNGVLDFGSGGGGAVAVPDSLFCPQQEQFLQRWNTNKENCCYVGIEPSFDLDLKRKTCSPPTSSSTLSSSRSGGRGGGGCGSTDSTTAAATAGEKENNPPQAGLEVGQGRCGLGMEDWESVLSEAPGQDNSILKLIMGDIEDPSMVLTKLLQGGSGSQDVEFNGFSLVDQSSVLDPITSVNFVSSIDPSGAGNCSDFPFNSHNNVSPNVRRVGSGVNPNPGFPASGSNLPSVSLPQGVFQPQQQQHQAIEPLEEKLQALNPQFILNQNQSQFMPNPGLVLPLTYGQLQEHHQLLAQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQLQLLPHHLLQRPSIVVAPKQKMVNPGGSEDLATHQLQQAITEQLFKAAELIDAGNLELAHGILARLNHQLSPIGKPFQRAAFYFKEALQFLLHPNANNSSLTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELKITAFVSPSHHDEIELSFTQENLKQYAGEINMSFELEILSLESLNSASWPQPLRDCEAVVVNMPIGSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHLIFALQFYSGLLESLDAANVHPDILQMIEKYYLQPAMEKLVLGRHGLQERTLAWKNLLLSSGFSPLTFSNFTLSQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02989 739 MobiDBLite consensus disorder prediction 69 106 - -
Pste5g02989 739 ProSiteProfiles GRAS family profile. 373 738 IPR005202 -
Pste5g02989 739 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 342 734 IPR005202 -
Pste5g02989 739 Pfam GRAS domain family 383 738 IPR005202 -
Pste5g02989 739 MobiDBLite consensus disorder prediction 67 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02989 Pste-Chr5 22749672 22751891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02989 349 739 GRAS Transcription Factor Family AT4G00150 56.359 2.30e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste5g02989 GRAS 6.5e-91 CL0063