Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02982 GAGTATGGGATTGGATGGCTCTATCAACATGAGGTCTAACCTTACATGGAAGTTTCCCCTTGATTCTGGCTTCATTTACTTACTAAGGTTATACTTTTGTGAGTTTAACCCATTTGCTAACGAGCCTGATTACATTTGGTTACTGATTTGGCAGATGTTCTCTTATGGAGCAAAAAGAAGGGTGTACCCGTTGTTAGACAGTATGTGGTTCTCATCCCTAAAAAAACAAAACCTTTTAATGAAAATGCAGCATCACCCTTTAAGCGTGATCCATGATGCACAAGTTAATGCAATTGAAGTCTTCAAAATCAGCGATTCTCGCTGGATGAAACCCAGACCCCCTGCACCAGCCCCGTTTGACCCCTTCCAAAGTTCAAACAAGAACAATAGTGGCTCCAAGAAAACCCTTTTTCTAGTGTCATTTTTGTCTTTTGTTGTTGCTTTCTTCCTCGTCAAACGCAAGAAAAAGAATATTTCCGATCACAAAGACAGAAAGTCTAGCGAGTGTGGCTCCTCAATGCTACCAATCAACCTCTGTCATCATTTCCCAATCACGAAAATCAAAGCGGCTTCCAATAACTTTAACGTCCTCCTCGTAGTTGGAGTAGGAGGCTTCAGCAACATGTACAAGGGATACATCAACATCGACAACAATTCAACACCTGTTATGATAAAAAAGCTGAAATCGGGTCTAAACGAGTTCTTGAACGATATCCAAATGCTCTCTCAACTTTGTGATCTCCATCTTGTTTCCATCATCAGGTACTGCTACGAAAACAATGAGGTGATACTCGTGTATGATTACATTGATCGTGGAACCCTTGGTGACCATCTCTACTGCACCAATAACCCTTCACTCTCATGGAAGCAAAGGCTTCAAATCTGCATAGGTGTTGCACGAGGACTACATTATCTCCATACAAGGGTATTGTCTGGGAGGAAGCCTTTGCTCCGTGTGGTGGAGAACCGACAAGTGTCACTGGTTGATTGGGCGAAGCATCTCTATCAAAAAGGCTCTCCAAGTGAAATTGTGGATCGAAAGCTAAAGGACCAAGTGACATCCCACTATTTGCAAAAATTTGGTGAGGTGGTGTTGAGTTGTTTTCTTAAGGATGGGACTCGA 1123 0.423 MGLDGSINMRSNLTWKFPLDSGFIYLLRLYFCEFNPFANEPDYIWLLIWQMFSYGAKRRVYPLLDSMWFSSLKKQNLLMKMQHHPLSVIHDAQVNAIEVFKISDSRWMKPRPPAPAPFDPFQSSNKNNSGSKKTLFLVSFLSFVVAFFLVKRKKKNISDHKDRKSSECGSSMLPINLCHHFPITKIKAASNNFNVLLVVGVGGFSNMYKGYINIDNNSTPVMIKKLKSGLNEFLNDIQMLSQLCDLHLVSIIRYCYENNEVILVYDYIDRGTLGDHLYCTNNPSLSWKQRLQICIGVARGLHYLHTRVLSGRKPLLRVVENRQVSLVDWAKHLYQKGSPSEIVDRKLKDQVTSHYLQKFGEVVLSCFLKDGTR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02982 373 ProSiteProfiles Protein kinase domain profile. 193 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02982 373 SUPERFAMILY Protein kinase-like (PK-like) 167 306 IPR011009 -
Pste5g02982 373 Gene3D Transferase(Phosphotransferase) domain 1 173 341 - -
Pste5g02982 373 Pfam Protein tyrosine and serine/threonine kinase 198 307 IPR001245 GO:0004672|GO:0006468
Pste5g02982 373 FunFam receptor-like protein kinase FERONIA 153 267 - -
Pste5g02982 373 PANTHER OS07G0166700 PROTEIN 308 369 IPR045272 GO:0004714|GO:0006468
Pste5g02982 373 Gene3D - 5 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02982 Pste-Chr5 22676301 22678453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02982 307 371 Receptor kinase-like Gene Family AT3G51550 36.923 2.49e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste5g02982 PK_Tyr_Ser-Thr 9e-16 CL0016