Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02976 CTTTATCTTCCCATAGTTGTGACTTGTGTGTTGTCCACAGTGAAATACCTAGGACAGGGACGGTGCCAAGATGTTGCGGCTGCGTCCATAACCTTACCTTAGCCACTTTTTCTCTCAACATTTTCAACCTTCGTATTGTATCCCAACAGAACAGAACATCTTTGCTTTTTGCAGACATGGATTCTTCTGAAAACCAGGAACATCAACATGGTCAGAACCAATCTCAAAAACCATCGTATGATCAATCATCACAACCTTATTATCCCTCTAACCAACCCCAATTTCAACAACACCCCAATTCAATCCCAGTTGCCCCGGAACCCTCTCAGCCTCACACGCTGAACCCGGTTCAGCCTGCGCCGGTTGCCGGTTCGCTCAACCCTGACGCGGTGGCTGTTGTGACCGGTGCTCTCACGCAGCTTGTGGGAAACGTTGATGGGGGGCACAGGGAACGGGTTGGGCCATCTCATTACAGAGGTGCAGGTCGCAGGGGTGGTAGATTCCCATTTAGGGGCCTTGGTCGTGGCCGATTCAATCACCACCGTGGTAGGGGACGTGGCAGGGGTGGTGATGGTAAACAGTTCTCATCTCATTCTACAGAAGCCGCAGTTGCTAATGTAGCAGATCCACCTGCTGCTGATGGAACTACTTTAGTGGCGCAACCATCATCAGTCTCTGGGCAATCATCATTACCTAATCCATCACAAGTTCCATCTGCATCATCGAAGACACCATGTAAATTATGGTGTGACATATGCAAGGCTGAGTGCAATACCCCAGAAATGTTGGAGCAGCATAAGAATGGAAAGCGGCATAAGAAGAACTTGCGTGTGCATGAAGAATTACAAAGATTCAAAGCTCTAAATGGACAACAAGGTGGAAATATTTCTACTTCTCAATCAAATTTAACTATCCACCCTGAGAAAGTTCAGGAGTCTGAGAATAAAGGATTACCGGAAGAAAATATGAGCTCTGAAGCTACAACTGATAATGATAATGATGAAACCAAGCTTCAGAATAATACAGAAGGGGTTTCTGAAGTTCAAACTGAAGAGCCTCAGAAGGAACCTGGAGACAACTCTGCAAAACAGGTTCATGGATCCAAGCGTAAGATGAAAGGATCCAGAGGAGGTAAATACATGAGGAATGAGGATGGATCAAGAAAAGCAGTGGAACCTCCGAATCCTAAGCAAGTTACATCTTTTATATGTGAGTTGTGCAATGTTAAATGTGATTCCCCGGTTGTTTACAACAGTCATTTGATAGGAAAGAAGCACTTGTTGAATGTTAAGCGTGTCTATGGCCACCAGGCTTTGAATGGAGAAGCAGTGAGCCAACCACTTCACCCTCCTGATATGAATGCTGTGTCAAATGCAAATAATTTTCCAGTCCAACAGGGTGTTAGTGTCCCTGATCCGCAAAACCTTCTGGCTCAGATCCTGTTGACTGTGTTGTCCCATGTCCAACTACCAGCAGCTGCACCACTGCCAGGTCCTTCAGCTACTCAGATACAAGCGCCAACATTGATGGCCGGATCAAGTCATGAATCCCCATCTAAAAATTTGTCACAGACACAAGTGTCAGATTCCTTGGCATATTTTGAGGGCAAAAATCCTACTGGTGAAACCAAAGATCAGATGTCACCTGTCACACTGATGCTGGATCAGACTGCAGGATCGAGTAATAATGGTAACTTTGAAACTGCTGATGGAACTCCTGCAAAGGAAGAGATGGCGGTGAAACTTTCCCAGAATGCTTCGGTTATGACTCCGACTAAAAACCTAGATGCAGCAAATAAACAAGTACCTTCATAATGTGAAGATCCAACATCATAGACATTTAAAATGCTGTATGAATTGCTGTTGAGGATGTCAGGGTACATGCCAGAAATCTGTTATTTTGCTGCAACTCCTTTCGATGTGATGAGTGACTCTGTCTACATGTATGGCAAACTAAACAAGTAGCTGCAACATGGTATCTATCTATCTATCTACAAATGACCCAAAGTGGCTGATTAGAGGTGGGTTAAATGACTAGATTGAGGCAATTTTTTATTGTCTGGAATGAATATACCCCTCTTAATTATTTGTACAGCAAAAGAAAATGTTGGACAAAAATTTCTTTGCATCATTGTAGAGCTAGAGAAACCTTACATGTAGCAAACTTCTTATATACTCTTTTATGGAGCCAAAAAATATTACTAT 2204 0.436 MDSSENQEHQHGQNQSQKPSYDQSSQPYYPSNQPQFQQHPNSIPVAPEPSQPHTLNPVQPAPVAGSLNPDAVAVVTGALTQLVGNVDGGHRERVGPSHYRGAGRRGGRFPFRGLGRGRFNHHRGRGRGRGGDGKQFSSHSTEAAVANVADPPAADGTTLVAQPSSVSGQSSLPNPSQVPSASSKTPCKLWCDICKAECNTPEMLEQHKNGKRHKKNLRVHEELQRFKALNGQQGGNISTSQSNLTIHPEKVQESENKGLPEENMSSEATTDNDNDETKLQNNTEGVSEVQTEEPQKEPGDNSAKQVHGSKRKMKGSRGGKYMRNEDGSRKAVEPPNPKQVTSFICELCNVKCDSPVVYNSHLIGKKHLLNVKRVYGHQALNGEAVSQPLHPPDMNAVSNANNFPVQQGVSVPDPQNLLAQILLTVLSHVQLPAAAPLPGPSATQIQAPTLMAGSSHESPSKNLSQTQVSDSLAYFEGKNPTGETKDQMSPVTLMLDQTAGSSNNGNFETADGTPAKEEMAVKLSQNASVMTPTKNLDAANKQVPS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02976 545 SUPERFAMILY beta-beta-alpha zinc fingers 328 376 IPR036236 -
Pste5g02976 545 MobiDBLite consensus disorder prediction 496 510 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 158 184 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 1 66 - -
Pste5g02976 545 Gene3D Classic Zinc Finger 172 222 - -
Pste5g02976 545 Gene3D Classic Zinc Finger 322 373 - -
Pste5g02976 545 SMART c2h2final6 189 213 IPR013087 -
Pste5g02976 545 SMART c2h2final6 343 367 IPR013087 -
Pste5g02976 545 MobiDBLite consensus disorder prediction 290 307 - -
Pste5g02976 545 Pfam Zinc-finger of C2H2 type 190 213 - -
Pste5g02976 545 Pfam Zinc-finger of C2H2 type 343 367 - -
Pste5g02976 545 PANTHER OS06G0651300 PROTEIN-RELATED 8 400 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 526 545 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 496 516 - -
Pste5g02976 545 SUPERFAMILY beta-beta-alpha zinc fingers 172 221 IPR036236 -
Pste5g02976 545 MobiDBLite consensus disorder prediction 82 184 - -
Pste5g02976 545 SMART ZnF_U1_5 340 374 IPR003604 GO:0003676|GO:0008270
Pste5g02976 545 SMART ZnF_U1_5 188 220 IPR003604 GO:0003676|GO:0008270
Pste5g02976 545 MobiDBLite consensus disorder prediction 8 44 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 318 332 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 229 249 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 228 336 - -
Pste5g02976 545 MobiDBLite consensus disorder prediction 450 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02976 Pste-Chr5 22627900 22632675 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste5g02976 zf-met 9.1e-06 CL0361