Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02962 GTTTTTTCCCCCTTAGACGCAGCTTTTATTAATTTAATTTTGTGTATTTTGATCGAGTTTTATATTAATTTACGAGGATCTTTAGGTTGGTTTGTTTAGGGTTTTTTCTTCATTTTTTAATTGTTTTTAATCGAGAGATTATCGATGCGACGCTGGGCTTCCCGTTGGATTTGTGATATTCGGTAGATGGATCTCTGATGTTCTTCGTTAATTTCCGCAAACAAAAGGAAGCAAGTGATGGGGTTTTAAGCTGTTAAAGGCAGTGAAGTTTGGTGCAAAATGGCGTCAGTTGGTGTGGCACCAACATCTGGCTTGAGAAAATCCAGTGGTGTTGATAGATTGCCAGAGGAGATGAATGACATGAAAATTAGGGATGATAAAGAAATGGAAGCCACTGTTGTTGACGGTAATGAAACCGAGACTGGACATATCATTGTTACTACCATTGGGGGTAGAAATGGTCAACCGAAGCAGACTATAAGCTATATGGCAGAGCGGATTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAAAACCGGGAGCTGCAAACAATGCGCCTTCTTGACCACCCTAATGTTGTCTCGTTGAAGCATTGTTTCTTTTCAACCACTGAAAAGGATGAACTATACCTTAATCTGGTACTAGAGTATGTTCCTGAAACAGTTAATCGTGTGATCAAACATTACAACAAGTTGAATCAACGGATGCCTCTAATATATGTGAAACTCTATACATACCAGATCTTTAGGGCACTATCTTATATTCATTGTTGCATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTATTAGTTAATCCACATACTCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGGTAAAAGGCGAACCAAATATATCGTACATATGTTCTAGATATTATAGAGCGCCTGAGCTTATATTTGGAGCAACTGAATATACTACAGCTATTGACATTTGGTCAGTTGGTTGTGTATTGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAGAGTGGAGTTGATCAGCTTGTTGAGATCATTAAGGTTCTGGGAACGCCAACAAGGGAAGAGATCAAGTGCATGAATCCTAACTATACAGAATTTAAATTCCCACAGATAAAAGCACATCCATGGCACAAGATCTTTCACAAGCGCATGCCTCCAGAAGCTGTTGATTTGGTATCAAGACTACTACAATACTCCCCTAACTTGCGGTGCTCAGCTTTAGATGCCTTGACCCATCCTTTCTTTGATGAACTTCGTGACCCAAATACTCGATTGCCAAATGGTCGTTTCCTTCCGCCGTTGTTTAATTTCAAATCTCATGTTATGGCTAATGTTGTGGATGTTGTTGCTGCCTGTGCACCAGAACTAAAGGGAGTTCCAGTTGAGATTTTGGTGAAATTGATTCCAGAGCATGCGAGGAAGCAGTGCCCGTTTCTTGGCTTGTGA 1539 0.4074 MASVGVAPTSGLRKSSGVDRLPEEMNDMKIRDDKEMEATVVDGNETETGHIIVTTIGGRNGQPKQTISYMAERIVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVNRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHCCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALDALTHPFFDELRDPNTRLPNGRFLPPLFNFKSHVMANVVDVVAACAPELKGVPVEILVKLIPEHARKQCPFLGL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02962 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Pste5g02962 419 FunFam Shaggy-related protein kinase kappa 149 411 - -
Pste5g02962 419 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Pste5g02962 419 CDD STKc_GSK3 64 356 IPR039192 -
Pste5g02962 419 MobiDBLite consensus disorder prediction 1 23 - -
Pste5g02962 419 SUPERFAMILY Protein kinase-like (PK-like) 68 380 IPR011009 -
Pste5g02962 419 Gene3D Phosphorylase Kinase; domain 1 53 148 - -
Pste5g02962 419 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02962 419 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 413 - -
Pste5g02962 419 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02962 419 Pfam Protein kinase domain 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02962 419 Gene3D Transferase(Phosphotransferase) domain 1 149 393 - -
Pste5g02962 419 FunFam Glycogen synthase kinase-3 beta 53 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02962 Pste-Chr5 22504129 22508256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02962 69 362 MAP Kinase Gene Family AT1G73670 38.339 9.45e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pste5g02962 Pkinase 8.2e-65 CL0016