Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02960 ATGAGATACAAAAACTTGGTATTGGTCACTTTTATGATGACATTGGTTGTTAGTCAATTAGAGAATTGCAAAGTTTTTGGTGCTAGTCATTATGACCACTCACACAAAAACACAACCACCAAAATACTCCAAAGTAGTGGTTTCATTCAACGAAAGGACACCCATTTTTTTCTAAATGGGAAGCCATACTACTTCAATGGATTCAATGCCTATTGGTTAATGAACATAGCATCGGATCCATCCACAAATTCTAAGGTCACTATAGCCCTGCAAGAAGCTTCTCAACATGGTTTGAATGTAGCAAGAACCTGGGCATTCCACGATGGAGGTTACAATGCCCTTCAAATTTCTCCCGGTTCTTACAATGAGAATGTCTTCAAGGGACTGGATTTTGTGATTTCAGCAGCAGGAGAAAATGGAATACGACTGATATTAACCCTAGTAAATAACTGGAAGGATGATGGTGGGAAGACTCAGTATGTCCAATGGGCAAGGGAACGTGGCCAACTTGTAAAAAGTGAAAATGATTTCTTCACACACCCCGTTATTAAGCAATACTACAAAAATCATGTCAAGACTGTGTTGACAAGAAAGAATACCGTAACTGGATTGGCATATAAGGATGACCCAACCATTTTTGCCTGGGAACTTATGAACGAACCGCGTTCCAGAAGCATCGACAAAGGAAAATCAATTCAGGATTGGGTGAAGGAGATGGCAGTGTATGTGAAATCCATTGATAGAAATCATTTACTTGAAGTGGGGCTTGAAGGATTTTATGGTGAATCAACGCCACAAAAGAAGCAATTCAATCCGAGTTATGAATCAGAAGGAACTGATTTCATTTCTAATAATCAATTTCCTGAAATTGATTTTACAACCATCCATCTCTACTCTGATCAATGGTTAGCTCACGCTAATGAAACGACCAAGGATGTCTTTATTAACAAATGGGTGGAAGCCCATGTTGAAGACTCGAATAATGTTTTACGAAAGCCCATTCTTATTAGTGAGTTTGGAAAGTCTTCCAAGTCTTCAGGATACAATTTGATTAAAAGAAATATTTACTTTGAGAAATTATACAATTTCATATTCAACAGTGCAAGCAAAGGGGGAGCATGTGCAGGTGGGCTTTTTTGGCAACTATTAAGCCCAGGAATGGATAACTTCCGTGATGGCTATGAAGTCATCTTCCAAGAAAGTCCTTCAACTGCCAACATAATTGCTCAACAATCTAAGAAGATGTCAAATCTCAAATAA 1260 0.3833 MRYKNLVLVTFMMTLVVSQLENCKVFGASHYDHSHKNTTTKILQSSGFIQRKDTHFFLNGKPYYFNGFNAYWLMNIASDPSTNSKVTIALQEASQHGLNVARTWAFHDGGYNALQISPGSYNENVFKGLDFVISAAGENGIRLILTLVNNWKDDGGKTQYVQWARERGQLVKSENDFFTHPVIKQYYKNHVKTVLTRKNTVTGLAYKDDPTIFAWELMNEPRSRSIDKGKSIQDWVKEMAVYVKSIDRNHLLEVGLEGFYGESTPQKKQFNPSYESEGTDFISNNQFPEIDFTTIHLYSDQWLAHANETTKDVFINKWVEAHVEDSNNVLRKPILISEFGKSSKSSGYNLIKRNIYFEKLYNFIFNSASKGGACAGGLFWQLLSPGMDNFRDGYEVIFQESPSTANIIAQQSKKMSNLK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02960 419 Gene3D Glycosidases 44 419 - -
Pste5g02960 419 PANTHER - 6 418 IPR045053 GO:0004553
Pste5g02960 419 FunFam Mannan endo-1,4-beta-mannosidase 6 45 419 - -
Pste5g02960 419 SUPERFAMILY (Trans)glycosidases 48 407 IPR017853 -
Pste5g02960 419 Pfam Cellulase (glycosyl hydrolase family 5) 59 346 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02960 Pste-Chr5 22487470 22490071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02960 7 419 Glycoside Hydrolase AT5G66460 54.722 9.13e-163 463