Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02957 ATGGGGACTGAAAATCCTGGGCGTTCAACCTTTCCATCAAGACCTGCTTCCTCGCCTTTTGTTGCTGCGCAAACAGTGACTCCTTTTTCGTCAACCGCTCCTGTGGCTGGATCAGAGCCCCCTTCTTCTTTTCGCCCTACTCCTCCTCCGCCGCAAGGCGCCACGCCATTTTCGTCGGCGGGACCTGCTGCAGTTAGACCTGGGGCACCCAGTTTTAGACCCGCGAGGTTCAGTGATCCATCAGTGCCTCCTCCTCCTCGACCATCTAATGCCCCACCGTCCTCTGGACCTTTTCAGCAGTTTCCACCACCGCCCTTTCCTCCATCTACCATGCACCCCAGATGCCCTTTGTTCCCATGGGCTCTCCCCACCCATTTGGCTTCCAATGTTCCTCCCCCCGCTACATTTCAACCATCTTTTCCTGGCTACCCTACTAAGCAGGCTGCTCCTGAAATGCCAGCTCCACCTTTCCCTTCTAATCAACCAAATTATGGTCCTGCCCCTCCTCCAGCGCCTTCTCCTTTTTTGTCTCATCAAGGAGGCTATGTTCCTTCGCCGTCAATGCCTCCTCCGCCAGGTGTCCAGCCAATGCAGCAGCCTGGATCTGTGCCCCCTATTGGTGGTGTTCAGGGCTTAACAGAAGACTTCAATGCTCTCACAATGCAAACTCGTCCTGGAACAATGGATGCATTATTTGACGCCAAGGAACTTCCAAGGCCATTAGAAGGTGATGTAGAACCAACGAGTTTGGTTGACATGTATCCAATGAACTGCAATCCCCGGTATCTACGACTCACAACCAGTGCGGTTCCTAGCTCTCAGTCCTTGGCTTCAAGGTGGCATCTTCCTCTTGGGGCGGTTGTATGTCCTCTAGCTGAACCTCCTGATGGGGAAGAGGTGCCTATAGTTAATTTTGCTCCAGCTAGTGTTGTCCGCTGCAGAAGATGTCGCACATATGTGAATCCTTATATGACGTTTACGGAAGCTGGAAGAAAGTTTCGTTGCAACGTCTGTACCTTGCTCAATGATGTTCCTAGTGAATACTATGCACAATTAGATGTGACTGGAAAAAGAGTTGATATAAATCAACGACCTGAGCTCACAAAGGGGACTGTAGAATTTGTTGCCCCTGCAGAGTATATGGTGCGGCCTCCTATGCCACCGGTGTATTTCTTCCTCATTGATGTTTCCATATCTGCTGTTAGAAGTGGCATGATTGATGTTGTGGCCAATACAATCAAGTCATGCCTAGATGAATTGCCTGGCTTTCCACGTACACAAATAGGGTTTGCAACTTTTGACAGCACGATACATTTTTACAACATGAAGTCTTCCTTGACTCAACCACAGATGTTGGTAGTGTCAGATTTGGATGATATATTTATTCCACTGCCAGATGATCTTCTTGTTAACTTGTCTGAATCAAGAAGTGTGGTAGAAGCCTTCCTAGATAGCTTGCCAACTATGTTCCAGGACAATGTTAACTTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCATTTATGGTTATGAGTCAACTTGGAGGGAAGTTGTTAATATTTCAAAACACACTCTCATCTCTTGGTGTTGGCCGTTTGAAGTTACGTGGAGATGATTCTCGTGTTTACGGGACAGACAAAGAACATGGACTGAGACTGCCTGAAGATCCATTCTATAAACAAATGGCTGCTGAGTTTTCCAAGTACCAAATCTCAGCAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCTTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTACTATCCAGCTTTCCAATCAACCATTCATGGGGAGAAATTGAGATATGAATTAAGGAGAGACCTTACCAGAGAAACTGCATGGGAAGCTGTAATGCGTATTAGATGTGCTAAAGGTGTTCGCTTCACAACTTACCATGGAAACTTCATGCTAAGGTCTACTGATTTGTTAGCACTTCCCGCTGTAGATTGTGATAAAGCCTTTGCCATGCAGTTATCACTTGAAGAGACATTGTTGACTACTCAGACAATGTATTTCCAAGTTGCATTGTTATATACTGCATCTTGTGGTGAGAGGCGAATAAGAGTACACACAATGGCAGTTCCAGTAGTTACTGAGTTGGCAGATATCTATCGCCTGGCTGATACTGGTGCAATTGTATCACTGTTAAGTAGGCTAGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGCACTGCTGTTCAACTGAGAATTGTGAAAGCCCTCAGGGAATATCGAAATCTTTATGCTGTGCAACATCGCTTGGCCAACCGAATGATATATCCTGAGTCTTTAAAGTTTTTAATGTTGTATGGATTAGCCCTTTGTAGATCAACAGCTCTACGTGGAGGGTATGGTGATGTTCCACTGGATGAACGATGTGCAGCAGGGCACATAATGATGACTGTATCAATAAAAAGACTGTTGAAACTTCTCTATCCTAGCTTGATTCGACTTGATGAATATCTTCTTAAGGCATCTGTACAGGCTGATGACTTAACAAGTGTTGAGAGAAGGTTATCTTTAACTGGGGAGAGCTTAGACTCTAGAGGCCTTTATCTATATGATGATGGCTTCCGGTTCATTGTATGGTTTGGAAGGGTGATTTCACCTGATATAGCCAAGAATATACTTGGGGCAGACTTTGCAGCAGAGTTATCAAAGGTATTGTATATTGTTGCTATACAAAAATATGTTCATAATAGGTATTTTTCAAGGCAGAGGAGAGTTTATTATTGGCTGTCATGTTGA 2799 0.4498 MGTENPGRSTFPSRPASSPFVAAQTVTPFSSTAPVAGSEPPSSFRPTPPPPQGATPFSSAGPAAVRPGAPSFRPARFSDPSVPPPPRPSNAPPSSGPFQQFPPPPFPPSTMHPRCPLFPWALPTHLASNVPPPATFQPSFPGYPTKQAAPEMPAPPFPSNQPNYGPAPPPAPSPFLSHQGGYVPSPSMPPPPGVQPMQQPGSVPPIGGVQGLTEDFNALTMQTRPGTMDALFDAKELPRPLEGDVEPTSLVDMYPMNCNPRYLRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNPYMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDVTGKRVDINQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIDVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVEAFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLSSLGVGRLKLRGDDSRVYGTDKEHGLRLPEDPFYKQMAAEFSKYQISANVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSTIHGEKLRYELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTMYFQVALLYTASCGERRIRVHTMAVPVVTELADIYRLADTGAIVSLLSRLAIEKTLSQKLEDARTAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLMLYGLALCRSTALRGGYGDVPLDERCAAGHIMMTVSIKRLLKLLYPSLIRLDEYLLKASVQADDLTSVERRLSLTGESLDSRGLYLYDDGFRFIVWFGRVISPDIAKNILGADFAAELSKVLYIVAIQKYVHNRYFSRQRRVYYWLSC 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02957 932 SUPERFAMILY Zn-finger domain of Sec23/24 301 384 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Pste5g02957 932 MobiDBLite consensus disorder prediction 132 184 - -
Pste5g02957 932 Gene3D Sec23/Sec24 helical domain 711 829 - -
Pste5g02957 932 SUPERFAMILY Helical domain of Sec23/24 722 829 IPR036175 GO:0006886|GO:0006888|GO:0030127
Pste5g02957 932 SUPERFAMILY vWA-like 385 624 IPR036465 -
Pste5g02957 932 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 841 903 IPR036180 -
Pste5g02957 932 MobiDBLite consensus disorder prediction 77 110 - -
Pste5g02957 932 PANTHER SEC24-RELATED PROTEIN 52 905 - -
Pste5g02957 932 MobiDBLite consensus disorder prediction 1 110 - -
Pste5g02957 932 Pfam Sec23/Sec24 zinc finger 311 348 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Pste5g02957 932 CDD Sec24-like 385 626 IPR041742 GO:0006886|GO:0006888|GO:0030127
Pste5g02957 932 MobiDBLite consensus disorder prediction 41 56 - -
Pste5g02957 932 Gene3D Severin 830 905 IPR029006 -
Pste5g02957 932 Gene3D - 256 369 - -
Pste5g02957 932 MobiDBLite consensus disorder prediction 1 38 - -
Pste5g02957 932 SUPERFAMILY beta-sandwich domain of Sec23/24 147 720 - -
Pste5g02957 932 MobiDBLite consensus disorder prediction 148 175 - -
Pste5g02957 932 Pfam Sec23/Sec24 trunk domain 385 621 IPR006896 GO:0006886|GO:0006888|GO:0030127
Pste5g02957 932 Pfam Sec23/Sec24 helical domain 722 825 IPR006900 GO:0006886|GO:0006888|GO:0030127
Pste5g02957 932 Gene3D - 258 710 - -
Pste5g02957 932 FunFam protein transport protein Sec24D isoform X1 387 624 - -
Pste5g02957 932 Gene3D von Willebrand factor, type A domain 387 624 IPR036465 -
Pste5g02957 932 Pfam Sec23/Sec24 beta-sandwich domain 627 711 IPR012990 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02957 Pste-Chr5 22466420 22474984 Dispersed