Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02954 GTGTCCGGGAAATGGGGTCTAATCTTAATGCTGAATTATCCAAGAAAACTTCCATTTTTGGTCTCAAAGTTTGGGAAATTGTTGGAATTTTAGTTGCATTGTCTATAATAGTCATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAATCTAGAAAAGAAAAAGATAGGATTCCCATAATTCAAATACCTAGTGTGTCCAAGGAAATCAAGGAAGTGGGAACTAATGTATTTGCTCCTCGTGATGGAATACTTGTTACAATTCAGGATAAGTCCAGTGCCAGTGACAGGGAATCAGACAAAGTCATGGTTCATTTAGGTGTGGGGAAGAAGAAGAATGGGGATGGCAGCACTCACTTAGATTCATTTCGATACATAGAGAAAGATGGAGGTTGTAATTCACGCTCTGAATCAGGAGAAGAAGGTAGCTCTGGCACGTTTACTGTGTGCAAGCAATCTTCTTCATACCCTATACCAGCTCCTTCACCTCTATCTGGCCTCCCAGAATTCTCTCACTTGGGTTGGGGTCATTGGTTTACCTTGAGGGATCTTCAACTTGCTACAAACCGTTTTTCCAAGGAAAATGTCCTTGGCGAAGGCGGGTATGGAGTTGTTTATCGGGGACAGTTGATCAATGGAACTCCTGTGGCAGTTAAAAAGATACTCAATAACTTTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACTTAGTTCGCCTTTTGGGGTACTGCATTGAGGGAACTCACAGGGTGTTAGTTTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCACCATGGATACCTTACCTGGGAAGCACGTATAAAGATTCTCCTTGGCACAGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCGAAGGTGGTACACCGAGATATCAAGTCGAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTTATGTCACCACAAGAGTTATGGGAACTTTTGGGTATGTGGCTCCTGAATATGCAAATACTGGCCTCCTAAATGAAAAGAGTGATGTTTATAGCTTTGGAGTTTTGCTATTGGAAGGAATTACTGGAAGAGATCCAGTTGACTATGGCCGACCAGCAAATGAAGTGAACCTGGTTGATTGGCTGAAGATGATGGTTGGAAGCAGAAGATCAGAAGAAGTGGTGGACCCCAATATTGAGGTGAAGCCATCCACCAGAGCTTTAAAACGGGCTCTCTTAACTGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCAAGTCGTTCGTATGCTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGACCGAAGACACAGAAGAAGAAATCGAGAGGGTAGTGGAGAAATGGAGTCCCAGAAAGAATATTCTGACACAGACAGGAGTGAGATTCAGGATTCCAGAGAAGAAAGAAGAGGTTGACAAGTGACAACACAAATGGCCCTAAGATGGATTGTTACTGAGAATTCGGTGCGGTAGTTGGGATGTATAAAGTGCTAGTTTTTTTTTTTCTTCATAGTTTTTTAAGTTCTTTGATTTTTTCCTACCTATGATGGGCATTTCAAAGGGGCTGGTACAGCTGGAGATATTTTTATTTTTAATATTATTTCCCATGAATTTGTTCTTGGTGTTCTTTGTCTGTAGGATAGCTATTGTTTGTGTATGAAGGTGGATGCTATTTCTAAGATAAGAACCCATGATATTGGGGGTGTGTACAGAATTTAACATCTTAATTTCAAAATGTGATCCATAAATCTGCTGCTATGGGAACGTGAGAAAGATAATGATTTTGATAGAAACTCCTCACAAGACTTTTTCACTCCGTTTAGAGTGTGAAAAAAAGAAATAGGCTAAGATAGAAAA 1979 0.4108 MGSNLNAELSKKTSIFGLKVWEIVGILVALSIIVILSVVSLCLTSRKKSRKEKDRIPIIQIPSVSKEIKEVGTNVFAPRDGILVTIQDKSSASDRESDKVMVHLGVGKKKNGDGSTHLDSFRYIEKDGGCNSRSESGEEGSSGTFTVCKQSSSYPIPAPSPLSGLPEFSHLGWGHWFTLRDLQLATNRFSKENVLGEGGYGVVYRGQLINGTPVAVKKILNNFGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRVLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGSRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRHRRRNREGSGEMESQKEYSDTDRSEIQDSREERRG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02954 508 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02954 508 MobiDBLite consensus disorder prediction 447 508 - -
Pste5g02954 508 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02954 508 Gene3D Transferase(Phosphotransferase) domain 1 265 476 - -
Pste5g02954 508 SUPERFAMILY Protein kinase-like (PK-like) 173 469 IPR011009 -
Pste5g02954 508 ProSiteProfiles Protein kinase domain profile. 189 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02954 508 FunFam Putative receptor-like serine/threonine-protein kinase 265 476 - -
Pste5g02954 508 PANTHER OS01G0323000 PROTEIN 4 490 - -
Pste5g02954 508 FunFam Putative receptor-like protein kinase 171 264 - -
Pste5g02954 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Pste5g02954 508 CDD STKc_IRAK 195 461 - -
Pste5g02954 508 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Pste5g02954 508 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02954 Pste-Chr5 22414673 22419009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02954 128 463 Trihelix Transcription Factor Family AT1G70460 47.214 1.16e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste5g02954 Pkinase 4.5e-47 CL0016