Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02950 ATGGGCGGAGATGGAGCGACGGCGAATGCGGAGGCGCAGTACGCGACGGCTAAGGTATCGGTGTGGTGGGATATCGAGAACTGCCACGTCCCCAAGGGTTCCGATCCGCATGCGATCGCCCAGAACATTAGCTCTGCCCTCGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCACACGCATCCCCGCCGCTGTACAACACGCTCTCTCCAGCACCGGAATCTCCCTCAACCACGTCCCCGCCGGCGTGAAGGATGCAAGTGACAAGAAGATCCTTGTTGACATGCTGTTCTGGGCAGTGGACAACCCTGCACCTGCTAATTATTTGTTAATTTCGGGGGATCGAGACTTCTCAAATGCTCTTCATCAACTTCGGATGAGAAGATATAATATTCTTCTCGCACAACCTCAGAAGGCATCTGCACCTCTTGTCGCAGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTACTGGGGAATCACAACAGCTTGGTATCGGTAGCCTTAGCCACATATCGTCTTCTGACTCCTTACAAATTCCAGTTACAAGTGTTGCTCAAATACAGCAACAGGTGGATTCTTATTCAGATGTTCATGTAGGAAATTCAAAATTTACAACTGGAGGAAGGGGATTTGAATCTCGGTATCAGGGGAAAACAAATTGGAGGAACCCAAGTCAATCAAATGGACCCAGAGCCATGAATCCGCCGCCAGTTGGACTTCAAGACAACCGTAATCGTAATAATACAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCACTAAGTGGATCTGCTAGGAATTATGTTCATGGCAATACCGATCAGTTATGGAGCAATAACAGTAATCTACAGGCCAATCATCAAGTTTCTTATTCGCAGCCTTTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTCCACCTAGTAATTCATATAGTCCAAATTCCCATACTTTTCCAACTTCAATGGTGCCACCTAGGAGTGGTGGTCCCAATTTCACTACAGGTCCACATACCAATGTGCCAGATATTGGTAATCTGAAAATTTCTGGATACCCTAATAGTGTTCATAACCTACCTACTCTTCCGCAACGGAGTGGAGAGTTGAAACAGAATCCTAATAGTAATGCTCCACTTCTTGTAAGATCAATTGATGAAAAAAATGGACATATGAGTGGCACACAACAGTTACACCAAGGTTATCAACATGGTCCAGAATATCAACCCACACCATTGGCAGCAAAGGGTAATAATAACCCTACTGGTAATGGTACGTGGGGTTCTCCAGGATGTCCTAAACCTTCTGAATATGTACAAGGCCTAATAGGGGTTGTTTTACTTGCCTTGAACTCCCTAAAAAATGCAAAAATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGGTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAAGCTCTTGAAAGTGCTATTGAGCAGAATATGGTGGTGAAACAGAATTTAGGTGCTTTGCCGTTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGTAATCCTAAGCAGTACTCAAAAGAAACATGGGATGAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGATCAGCATTAATGGCTACACAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAACATGTGCTTTAAAGATCTTTCTTTGGGTGATGTCCTTCAGATATTGAACATGTTAACTACTCATAAAAAATGGATCGCACATCATCCGTCTGGCTGGCAACCACTCAATATCACTCTTCCTGAGACAAACCCCAGTTCAGGGGTGGTTGCTGGCTCATAACTGCTCCTTGATTATGGTAATAGAAAGGCAGCCAGCGAAACTCATTGCAGTTAATGAATATAGTATATGAGCCAGTTGGACTAGGAATTGGCTGAATTATCCTCTTTCCCGTCTGTGAATCAAACGGTAGGTAGTAATGAACTGTATTACAATATGCATCTTGAGTATTTATGGTTATTTAACAAGCCTTCAGTTGATCTTGTGGGAGAAATGAATGTTGCACTTGGACAATAGTTGAAAAATACAAAACACTACAGTTTGGTGCGGCTGCTGAGGTTCCTTCTATGGCGTGCTTTGCATCACAGTGGATCTATCATGGAATAAGTATGATTTCCTGTGTCCCGAGCTTCTAAGCATTTCTATCTTCCTTCAGATATATATTTTGCTTGGAGATTGCCTTATTTGGCCGAACTCTTTGGGTCCTTTATTCATATATATTCTAAAGGTTGTGTCTTAGGTATTGGCCAATTATGTCTTTTGCACTTCTCCTGAAAATTGACGGACCTTCGAGCTAGTTAGGTAAATCATCTTCAATGCTGTTTGGCTATCACTTGGCAAGTGATCTACACAGTCAAATCAATCAAATTCTTCGGATGAACTGTGGAAGGCGATGTTCGATGATGGCATTGTTCAAAATCTAAATGTTACAGTAAGTTAAACTCCTGGACAGAGAGCACTTAATTTACACAAAATTGAAGGAGACTGCATTCTTAAAACCTTGCGTGATGCTCTTGATTTGTTATCTCAACACAAATACTTGGTATGTTTAAGATCTTGGAATTTGACTATGAAATAACGTTATGGAGTACTCAATGATTCAAAGGTGGTGAAACTAAATGGTTGTTACATCCTACTGCATCACTTGTTGCCGATGGTGCCTACAGAGTTGTGATATTTATTATTCATCTGGATTTAGCTTCTGGAAACCTGCTTAGCATTCGGTAATTCAATGGGGAATTAATCTGATCTTGCCGCTTCCTATTGCCTTGTAATGTAATCCGAATTTATTTAAATTTGCATTGTATCATATAGATAGTTTAATTATATCCCCACTATTTTTTTTTTCTTAAAATTTCCTTTGGTTGGAAATAACTGAGAGAAGCTAATTCCAACTCCAACCAAGATGAGTCAAAAAACTAGTTTTCTTGCTTTGGAAAGTGTATTTTCATGTTGAGCCAACTCCGGCTACAAAATCAAACATGTTAAAATAATCTGGT 3107 0.4162 MGGDGATANAEAQYATAKVSVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPAAVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSTGESQQLGIGSLSHISSSDSLQIPVTSVAQIQQQVDSYSDVHVGNSKFTTGGRGFESRYQGKTNWRNPSQSNGPRAMNPPPVGLQDNRNRNNTNSYRPGNFNPNVPLSGSARNYVHGNTDQLWSNNSNLQANHQVSYSQPLRPNNFPLQPPFPPSNSYSPNSHTFPTSMVPPRSGGPNFTTGPHTNVPDIGNLKISGYPNSVHNLPTLPQRSGELKQNPNSNAPLLVRSIDEKNGHMSGTQQLHQGYQHGPEYQPTPLAAKGNNNPTGNGTWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQYSKETWDEIEKFLTTPAGRSALMATQCKYEAGIVIKNMCFKDLSLGDVLQILNMLTTHKKWIAHHPSGWQPLNITLPETNPSSGVVAGS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02950 629 MobiDBLite consensus disorder prediction 216 295 - -
Pste5g02950 629 MobiDBLite consensus disorder prediction 254 295 - -
Pste5g02950 629 Pfam NYN domain 18 154 IPR021139 GO:0004540
Pste5g02950 629 MobiDBLite consensus disorder prediction 328 357 - -
Pste5g02950 629 MobiDBLite consensus disorder prediction 308 391 - -
Pste5g02950 629 MobiDBLite consensus disorder prediction 428 444 - -
Pste5g02950 629 PANTHER LIMKAIN B LKAP 13 509 IPR024768 GO:0005777|GO:0010468
Pste5g02950 629 MobiDBLite consensus disorder prediction 428 447 - -
Pste5g02950 629 Gene3D - 9 161 - -
Pste5g02950 629 CDD PIN_limkain_b1_N_like 18 142 - -
Pste5g02950 629 Pfam OST-HTH Associated domain 566 620 IPR025677 -
Pste5g02950 629 MobiDBLite consensus disorder prediction 367 391 - -
Pste5g02950 629 MobiDBLite consensus disorder prediction 216 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02950 Pste-Chr5 22362131 22366053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02950 8 200 C2H2 Transcription Factor Family AT5G61190 69.430 2.76e-84 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02950 5 22362131 22366053 Pste5g02950 5 22362131 22366053 ECH