Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02949 ATGGATGGCGATTCAAAAGAGAAGCAAGGGTTGATGTTGAACGTAATCATCATGGTGATATCCATTGTTACAATTGTAACGGTCACCGTTTGTGTTGTTGCAAACGTAGACGCTGTTCACAAACAAGACACAAATACAAGGAATATGAAGTCTCTTCTCACGGTTTGCATCGTAACGGAGGAACCAGAAAGCTGTTCCCGGGCGTTGAAACATGTAGGTGAGAGAGGCACGGTGTTGAATTACGTGAAAGCTGGTATTAGCGCAATCCTGGCAGAATTGTTGGTGGTGATTAGGCCTAAACCTCGTCTTGAAAAGGGCCTCACGCTTCTGCAGCAACAATCATATCAAGATTGTTTGGAACTGTTGAGTTTGGGAAAGGAAGAACTAGAATCTTTGTACATGATGGCAAATTCTTCTGGAGAATTGTACGAACTAAACAAAGATGATGTGATGAACGGCCTAAGTGCCGTCATTTCGTACCAACACACTTGTTCTGACGAGCTAATGCGAACAAATATCTATGAAGTTTTGGGGTATTCCTTACAAGTTCCAATTCTTCTTACAAAGATAACCTTAGCCATTGTTAGTAATTTCTCTGAGAATCCTCCTAATGGTAGCAAAGGAGTAGGACGACTAGATGGAGATCCAAGATGGTTCTCAGAAGAACAGCCTATAAATGCAGTTGTGGCTCAAGATGGAAGTGGCCATTTCTCAACCATAGCTAACTCACTCAGTGCATGCCCGAAGAATAACACGTGTGCTTGTATTATTTACGTGAAAAGAGGCAGATACGAGGAGAGGGTGGTGATTCCTAAGGATGTTGGAAAAGTGTTAATGTTTGGCGATGGACCTGAGGAAACCGTCGTGGTTGGTCTCAACACAAGAATAGTGACAACCTCCTTTCGAGCAGCTACTTTCGTGGTCATGGGAAAAGGATTCATCTGCAAAGACATGGGTTTCAGTGGCTCAGGAGCACCAGCACTCCTTGTGCTTGCAGATAATGCAGCATTCTTCAACTGCAAAATTGATGGCGAGGAAGGAAGCTTGTATGCAGTAGCCCAACGCCAATTCTACCGAGACTGTGAGATTCTTGGTAGTGTGGACATCATCAAGGGAGACTCTGCAACTGTAATTCAGAACTCACAAATCATTGTAAAGGCTCGAAATTCTTCTGATTTGGTTTTAAGGAGAAATGTGGTGAGTGCACAATCGAGGTTAGACAAGTATGAGAGAACAGGGTTAGTGATACAAAACTGCACCATCGCAGCACAAGAAGAAAGCAGCCATGCTCTTACTGCTACCACTTACTTGGGGTCCCCATATAGTGAATACTCAAGAACAATCATAATGGAATCATTTGTAGGAGACGTGATACATCCAAAAGGATGGTGTAAACGGAGTGATAACTATGGCATTGAAACAGCAACCTTCTTGGAGTTTGATAATAGAGGGCCTGGCGCAGGGACTGACAAAAGGGTCAGGTGGAATGGCTACACTCAAATTTTTGACAGATCCCAAATGCTTGGTTACACAGTTGCTCGCTTTATTCAATCAGACCAATGGCTGCTAAATACAGGCATTCCACACCAATCTGGCTTTGTGTTTTAG 1608 0.4335 MDGDSKEKQGLMLNVIIMVISIVTIVTVTVCVVANVDAVHKQDTNTRNMKSLLTVCIVTEEPESCSRALKHVGERGTVLNYVKAGISAILAELLVVIRPKPRLEKGLTLLQQQSYQDCLELLSLGKEELESLYMMANSSGELYELNKDDVMNGLSAVISYQHTCSDELMRTNIYEVLGYSLQVPILLTKITLAIVSNFSENPPNGSKGVGRLDGDPRWFSEEQPINAVVAQDGSGHFSTIANSLSACPKNNTCACIIYVKRGRYEERVVIPKDVGKVLMFGDGPEETVVVGLNTRIVTTSFRAATFVVMGKGFICKDMGFSGSGAPALLVLADNAAFFNCKIDGEEGSLYAVAQRQFYRDCEILGSVDIIKGDSATVIQNSQIIVKARNSSDLVLRRNVVSAQSRLDKYERTGLVIQNCTIAAQEESSHALTATTYLGSPYSEYSRTIIMESFVGDVIHPKGWCKRSDNYGIETATFLEFDNRGPGAGTDKRVRWNGYTQIFDRSQMLGYTVARFIQSDQWLLNTGIPHQSGFVF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02949 535 Pfam Pectinesterase 226 519 IPR000070 GO:0030599|GO:0042545
Pste5g02949 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 198 IPR035513 -
Pste5g02949 535 PANTHER PECTINESTERASE 25 523 - -
Pste5g02949 535 SUPERFAMILY Pectin lyase-like 225 530 IPR011050 -
Pste5g02949 535 FunFam Pectinesterase 4 223 533 - -
Pste5g02949 535 Gene3D - 225 535 IPR012334 -
Pste5g02949 535 Pfam Plant invertase/pectin methylesterase inhibitor 54 169 IPR006501 GO:0004857
Pste5g02949 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 199 IPR035513 -
Pste5g02949 535 CDD PMEI-like_3 54 199 - -
Pste5g02949 535 SMART PMEI_2 47 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02949 Pste-Chr5 22353436 22355115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02949 50 533 Carbohydrate Esterase AT2G26450 35.135 9.66e-90 286