Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02931 CGGCAAATACTGTGGTGTGTATAATCTGCCACCTCTTCTTCCTTCCTTCATTTTCTTTCTCTCTCTTGTTAGCATTATTACCACCTCGTAACTCTTCCTTGATTAGCTCCGAAATTAAAGACGAGAAAAGCATTTCCAACATTTAGTTGTCCATTGTTTGCGTCATTAGCCAGTTTTCCGCTGTCAAACAAGTGTTGTTTTGTTTGTCTGTCCCATGGCGAGAGTTTTCTGGGTTGGCATTGCTATAGGACTTGTTTTCAGCAACTGGGTTGATGGATTCGTAGGTTACGAACATCACTTCAATGAAACAGAGTTGTCCCTGTTAGAGGCTAATGAAGCTTCCTTATCCTACGCCGGGAGCAATCTTCTGTTGGTAGGACTCACTCTTATTCAAAATGCTGCTGCTCAAGGAGCAGTCTGCTTGGATGGAACATTACCTGGTTATCATTTGCATCGGGGATATGGATCAGGCACAAATAGCTGGCTTGTTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACCTGTGTGTATCGCAAGAAAACCCGGCGGGGATCATCAGATTTCATGGAAAAGGAGATACCTTTTACTGGAATATTAAGTAACAAGGCTGGAGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGGGATAGTGAAGATGAGACTGCAGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCGATCAGGCTCTACTTTCGGGATGCTCTGCGGGTGGCCTCGCCACAATTATTCATTGTGATGAATTTCATGGTCTCTTTCCAGGCACCACTAAAGTGAAATGTCTTAGTGATGCTGGGTTGTTTCTAGATGCGATTGATGTATCTGGTGGGCATACCCTCAGGAATTTATACAGTGGTGTTGTAGGATTGCAGGGTGCACAGAAGAATCTACCACAAATTTGTACTAATCACCTTGATCCCATTTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAGGACCCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCCCCATCTGCAGATCCACATGGCTATTGGCACGAATGTAGATTAAATCATGCTAAATGTACTGGACCACAAATCCAATTTCTGCAAGGGTTCAGGAATCACATGCTGAATGTTATTAAAAGCTTCTCAAGATCAAAGCAGAATGGCTTGTTTATTAATTCCTGTTTTTCTCACTGCCAAACTGAGAGGCAAGATACATGGTTTGCTGACAATTCTCCAGTTATTCGGAACAAGGTACAATTGCCCTGGCTGTTGGAGACTGGTATTTCGATCGATCAGGTGTCAAGACCATTGATTGTCCCTACCCTTGTGATAATACGTGCCATCATCTTATTTTCAGATGAGCAAAACAAAGTTTATCCATCATCTCATTCATTTTTGCGCTTCTTCTCACATCTCGACAGTGGAGAATTATGCTATTCAATTAAGTTATGGCAAAAAATAAAAGAAAAAAGGAAGCTGAAAAAGGCAAATTTAATCTGTCAACCATTATCATTTAGG 1627 0.4155 MARVFWVGIAIGLVFSNWVDGFVGYEHHFNETELSLLEANEASLSYAGSNLLLVGLTLIQNAAAQGAVCLDGTLPGYHLHRGYGSGTNSWLVNLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAGENPDFFNWNRVKLRYCDGASFAGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFADQALLSGCSAGGLATIIHCDEFHGLFPGTTKVKCLSDAGLFLDAIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVRTPLFILNAAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTGPQIQFLQGFRNHMLNVIKSFSRSKQNGLFINSCFSHCQTERQDTWFADNSPVIRNKVQLPWLLETGISIDQVSRPLIVPTLVIIRAIILFSDEQNKVYPSSHSFLRFFSHLDSGELCYSIKLWQKIKEKRKLKKANLICQPLSFR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02931 471 Pfam Pectinacetylesterase 52 382 IPR004963 GO:0016787
Pste5g02931 471 PANTHER NOTUM-RELATED 50 383 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02931 Pste-Chr5 22072610 22076404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02931 46 382 Carbohydrate Esterase AT1G57590 72.997 0.0 541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02931 5 22072610 22076404 Pste4g01404 4 10473727 10478842 ECH
Pste5g02931 5 22072610 22076404 Pste5g02931 5 22072610 22076404 ECH
Pste4g01404 4 10473727 10478842 Pste5g02931 5 22072610 22076404 ECH
Pste6g03839 6 27593057 27597107 Pste5g02931 5 22072610 22076404 ECH
Pste5g02931 5 22072610 22076404 Pste4g01372 4 10159749 10164000 PCT