Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02921 GCGGTGGTAAGGGCCGTTGTCGTCCCTCGCCTCAAGCTTTTGTAAATCTCACCAATTCACAGGCCTAATTTTGCAGTTATATGCTTATGAATGGCGTGGCGTGAGCTTGGAAAGAAGAGAATATATATGAATTTTACTAGAGCTTTGACTACAATACCATTTAGGCATGTGACAGGATCAAATTTTGCATCCTTCTTTTCTCGACAATCTGTTTATGCATCAGCAAGATGCATGCCAGATTCCACCAGCCAGTCATCTTATGGAGTTTCTAGTTTTGGCAGTGAGTCTAATGAATGTGGAATACGGTGCTTCCATGCTAGTTCACAAATCTGGGCAAGAAGTGATGCTGCATTAGGTTTGAAGACTCCAAATAGGGTGAAATATGTGAGAAGGGATGGCAGAAACCAGCCACCTGTTGGGGCTACTTATGCCCGTCGTAATGTCCCAGCTAGCAAATCTAATCCTGATAAAACAATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGCACTGGAAAATCAGTTTCTTCTTTGCAAGATATCCTCACTAATGTTGGTGAAAAGATTGAATCAGAGTTTGAGCTTCTCAGCATGGATATTGCTGAACTTGCTGCAATGGAAGCCGGTGTCAATGTTAAGAGGCTACATTCAGCTGAAGGTGCAGAAATTTTACCACGTCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACTTCTCTTCTTGATGCCTTGCGTCAAACATCAGTGGCAGCCAAGGAGGCTGGTGGCATAACTCAACATTTAGGTGCTTTTGTGGTGGTCATGCCGTCAGGAGCATCAATCACATTTCTTGATACTCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGGGCTGCAGTTACAGATATAGTGGTGCTGGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCCATGTCTCATGCAAAATCAGCTAGTGTACCAATTGTAGTTGCAATTAATAAATGTGACAAACCAGGTGCAAATCCTGAAAAAGTTAAACTGCAGCTTGCATCAGAGGGCTTGCTGCTGGAGGAGATGGGTGGGGATGTTCAGGCTGATATGATGGATCTTAAAGCACGAATTGATGGGCCTGCTCAAGCATATGTGGTGGAAGCAAGACTTGACAAAGGACGGGGTCCTTTGGTAACTACTATAGTGAAGGCAGGAACTCTAGTTTGTGGTCAGCATGTGGTTGTAGGTTCACAATGGGGAAGAATAAGGGCTATTAAAGATATGGCAGGGAAGTTAACTCAACAAGCAACACCTGCTATGCCCGTTGAGATTGAAGGCCTTCGAGGGCTTCAATGGCTGGACAAGCCATCTACTTCAGATGATTCCACAGAGGTTCCACAGAGGGTTGAAATGCCTGTAATTGTAAAATCAGATGTTCAGGGAACTGTTCAAGCTGTTACTGATGCGTTGAAAACTTTAAACAGTGCTCAGGTTTTGGTAAATATTGTCCATGTTGGCGTTGGGCCTATTTCTCAATCTGATGTGGACTTGGCTCAAGCTTGTGGCGCTTGCATAGTTGGATTCAACATCAGAAGTCCGCCTACTGCTCTTAATCAGGCAGCAAGTCGTGCCAATATCAAGATAATTCTGCACCGTGTAATTTACCACCTGTTGGAGGATATAGGCAATTTAATAATAGAGAAGGCCCCTGGGACTTCTGAAACCCAGGTTTCTGGGGAGGCAGAAGTGCTGAATATCTTTGAAATCAAAGGGAGCAAGTCCAAGGGACCTGATGTGAAGATAGCCGGTTGTCGAGTTATTGACGGTTTGGTGAGCAGGTCAGCAACCATGAGGCTTCTTAGGAGTGGTGAAGTGGTGTTTGAAGGACTTTGTACATCTCTTAAGCGGGAGAAACAGGATGTGGATACTGTGAAAAAGGGAAATGAGTGTGGGCTAGTAATCAGCAATTGGTATGATTTCCAGGTTGGAGACGTTATCCAGTGCTTGGAACAAGTCATAAGGAAGCCCAAGTTCATTAAGTCAGAGAGTGGTGCTGTTCGAATTGAGTGCTAATCCTGTTAGTTGATGATCCTTCAATGCACTTACGCACATTTTTGTGAGCCAGCAAAATAACTCCGCATGGGTGGATTGTTAGAGTAATTAAATTTTGTTGTACCAAAAGAAAGTGTAATTAATTATTAATTCTTGAGGCACAATTTGAAACGTTTAGTATACTAGGTTTTGACAGGTTTTTGACATGTGGCCTTGCACGTGCCTTATAAATGTGTCAATAATCTCGGAAGTTATACATTATAGGTTCAGTTTCACCCACCTTTTAACTCTATAATTCCTTAAAAAGAATATAAATGAGGCAATGGTAACATTCTAGCTCA 2399 0.431 MAWRELGKKRIYMNFTRALTTIPFRHVTGSNFASFFSRQSVYASARCMPDSTSQSSYGVSSFGSESNECGIRCFHASSQIWARSDAALGLKTPNRVKYVRRDGRNQPPVGATYARRNVPASKSNPDKTIEIFEGMTLVELAKRTGKSVSSLQDILTNVGEKIESEFELLSMDIAELAAMEAGVNVKRLHSAEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVVMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKSASVPIVVAINKCDKPGANPEKVKLQLASEGLLLEEMGGDVQADMMDLKARIDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQHVVVGSQWGRIRAIKDMAGKLTQQATPAMPVEIEGLRGLQWLDKPSTSDDSTEVPQRVEMPVIVKSDVQGTVQAVTDALKTLNSAQVLVNIVHVGVGPISQSDVDLAQACGACIVGFNIRSPPTALNQAASRANIKIILHRVIYHLLEDIGNLIIEKAPGTSETQVSGEAEVLNIFEIKGSKSKGPDVKIAGCRVIDGLVSRSATMRLLRSGEVVFEGLCTSLKREKQDVDTVKKGNECGLVISNWYDFQVGDVIQCLEQVIRKPKFIKSESGAVRIEC 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02921 662 Gene3D - 439 543 IPR036925 -
Pste5g02921 662 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 118 656 IPR015760 -
Pste5g02921 662 CDD IF2_eIF5B 202 339 - -
Pste5g02921 662 Pfam Elongation factor Tu GTP binding domain 203 325 IPR000795 GO:0003924|GO:0005525
Pste5g02921 662 Pfam Translation-initiation factor 2 439 533 IPR023115 -
Pste5g02921 662 CDD mtIF2_IVc 551 640 - -
Pste5g02921 662 FunFam Translation initiation factor IF-2 546 649 - -
Pste5g02921 662 Gene3D - 196 355 IPR027417 -
Pste5g02921 662 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 439 550 IPR036925 -
Pste5g02921 662 FunFam Translation initiation factor IF-2 195 357 - -
Pste5g02921 662 Gene3D Translation factors 545 647 - -
Pste5g02921 662 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 198 380 IPR000795 GO:0003924|GO:0005525
Pste5g02921 662 NCBIfam small GTP-binding protein domain 201 323 IPR005225 GO:0005525
Pste5g02921 662 SUPERFAMILY Translation proteins 546 647 IPR009000 -
Pste5g02921 662 SUPERFAMILY Translation proteins 350 420 IPR009000 -
Pste5g02921 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 367 IPR027417 -
Pste5g02921 662 MobiDBLite consensus disorder prediction 100 121 - -
Pste5g02921 662 FunFam Translation initiation factor IF-2 438 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02921 Pste-Chr5 21967965 21974080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02921 189 626 Eukaryotic Initiation Factors Gene Family AT1G76810 25.316 5.97e-21 96.3