LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g02896	GGAAAAGAAAAGCCCACAGTCTCTCATATCATCCCTGTCGTCTCCCGTAGTTCCCTTGTTAGTCAAACACACACTCCATTTCACACCTCTTCTCAATTTCCCTCACAAGGGCGTGCCCGTTAATGATTCTATTCGGGCACGCTTTTCTCCATGTTCATCTGTCACAATCCACGAAGAAGAAGGAAAAAACCTCACCTTTCTAAAATGGGTCTCTCTCTGTATTCGCCTCTCATGTGTGTTTCACTGCGCCGTCTTTGCTGGCTTTCTTAGATCTGTTTCTCAAGCAGTGTCCACGAGGTTAGATCGCAACATTTCCCTGCCAAAACTGCCTTTGCTGCTTTATCCCTTTGGCGCTGTTTGAGGGATTTTTTTTTTTTTTTATTCATACCCACTTTGCAAGGCAGTGTTTTGGCCTCTTTTTATGTTACTTTATCCCGAAACAGCAAATGGGTCGCATCCCTTTCAGCCTCGGAATTTGACGACGACGATGATTGTGATGATGGTGCATGGTGGTGACATGTGTAATCATGGGTGTTGTTAATAATTAGGGGTATATTAGGTTTTGAACTGGTTTGTATTTGTATCTGGTGATGGTGCTTAGGTTCAGAAACCTTGTGGCGTTGGCATCTCTGTGTCAGGGGTGTTTGCATTTGTGGGAATAATAATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCACTCTTTTTGTTATGTGAGGCCATCTATTTTTGAATCTCCTGCGATTACCCCATCAAACTCTGAGAGGTTTACTGTTGATTCTAGTATCCTTGATTCTGAGACATTGAGTGGCTCATTTAGGCATGAGGCCATAGAAGAGAGGCCTGGTAAAAATGTTTCCGAAACCACGTTCAAAACCATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAATCAGAATGCACTGCTTGCCAGTGATGTTCTAGAGCCTGCTGCATCGTTTGAGGGAACCTCGTCCTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCTTTAAACGGTTTCATGTCCGGACCTTTGGAGAGATTTGCCTCCGGTCCCTTGGACAAGGGTGGTGGTTTTATGTCCGGGCCTATAGAGAAGGGAGTTATGTCGGGTCCTCTTGATGCCACTGACAAGTCCAACTTTTCTGCACCACTTGCACATGGTCGTCGAAGGCCTCGCCTCCAACGCCTCATGAGAAGTGTCAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCCAAGCACTCTGTGGGTGGCAATTGGGTGCAGCGGTTATTCCTCCATCCAGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGACCTGAAGTTTCTCGAAACTGTGCTGAAGTTGGATCCTCTGAATTGGAGTATAAACATACACAAAATTTGCAATGGGCTCATGGTAAGGCTGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCGGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTATATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAGGATAATCCCATCGATCCACTTACACCTGAAGTCCTTCAAAATGGAGATGATGTAGTTGCTCTAGAATGTGGTAGGGAGGAAATGTCAGATGCTCATATCATTTCAAATGGAGAAAGTTCTTGCTGTTTAGAAAATTCTTGTCCTGTAATAGTGAAGGATCAATCATCTAATAGTGAGATAGTAGAGGTAAGTGCTGAAGTAAAGGTAAATACTGAACAGAAAAATTGTGGAAGTCCCAGTATTGTACATACTGTTCCTGCATCTGTTCCAATTGAACAATTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTTCTTCAGATGGAATCTTGGTATGAACAGGCGTCAGAACAAGGCAAGGATTCTGTAGTTCCCGGGGAAATAACACAAGAGAGGCAGATGAGATTCTGCTCACCTGATGGTAGAGAGGATAGGTCTAGATATGTGGATGAAGGTCCCACTACTTCAGGGGAAACTGGAGGTGCTGGGTTTAATTCGACCAACCAGGAGCCAATAGCTTCTTTTCCTGTTTCAGGACAAAGGGACAATTCAAGAAAGTCATTTATTGGTACGAAAATCAGAAAAATGTACAGGAAGCAGAAGTCCCTGCGTAAGAAACTTTTCCCATGGAGTTATGATTGGCATAGGGAGGAAGCTTATGCTGACAAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGGGCTCTAGAAAGAACAGAGGAGACATATTTGAATATGGTGGAGAATAATATGGACAAAAATCCTGAGCTTGCATTGATGGGATCATGTGTTTTAGTGATGCTTATGAAGGATCAAGATGTTTATGTTATGAACCTTGGAGACAGCCGTGTAATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATCCGTGTCTCATCAAAGATGACATAAGGCATGGGAATCGATCTAGAGAGTCATTGGTTGGTATGGAGCTGGATAGAATTTCGGAGGAGTCTCCAGTACACAATATAAACAAGCATGTTAACAAAATTAACAAAAACAGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCACAGCACAAGTATTGAAGAGGAAGTTTTTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGTCAGTTGA	2956	0.434	MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSILDSETLSGSFRHEAIEERPGKNVSETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLAHGRRRPRLQRLMRSVSGPMRNTFSRTFSKHSVGGNWVQRLFLHPVSQLAWNSKEAKFRPEVSRNCAEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKYIDKELEGLLWDYEDNPIDPLTPEVLQNGDDVVALECGREEMSDAHIISNGESSCCLENSCPVIVKDQSSNSEIVEVSAEVKVNTEQKNCGSPSIVHTVPASVPIEQLSGQGRRSVRLYELLQMESWYEQASEQGKDSVVPGEITQERQMRFCSPDGREDRSRYVDEGPTTSGETGGAGFNSTNQEPIASFPVSGQRDNSRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREEAYADKKLVESSGPIRICKSGVDHNAVLRAMARALERTEETYLNMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPCLIKDDIRHGNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRVS	763

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g02896	763	ProSiteProfiles	PPM-type phosphatase domain profile.	269	763	IPR001932	-
	Pste5g02896	763	SMART	PP2C_4	271	762	IPR001932	-
	Pste5g02896	763	CDD	PP2Cc	584	760	IPR001932	-
	Pste5g02896	763	MobiDBLite	consensus disorder prediction	498	524	-	-
	Pste5g02896	763	Pfam	Protein phosphatase 2C	703	761	IPR001932	-
	Pste5g02896	763	PANTHER	PROTEIN PHOSPHATASE 2C	273	760	IPR015655	GO:0004722\|GO:0006470
	Pste5g02896	763	MobiDBLite	consensus disorder prediction	476	491	-	-
	Pste5g02896	763	MobiDBLite	consensus disorder prediction	456	524	-	-
	Pste5g02896	763	FunFam	Protein phosphatase 2C 32	248	416	-	-
	Pste5g02896	763	SUPERFAMILY	PP2C-like	283	760	IPR036457	-
	Pste5g02896	763	Gene3D	-	523	763	IPR036457	-
	Pste5g02896	763	Gene3D	-	248	400	IPR036457	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g02896	Pste-Chr5	21699741	21703460	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g02896	1	761	PP2C-type Phosphatase Gene Family	AT2G46920	61.489	0.0	878