Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02895 TGTGTATTCTCTTATTCTACGCAATCCATAGTAAAGGGAAGGTTTGAGTGAGTATGGCGTCTTCATTATCAGCTCAATTGGTTCAATGTCGGAACTCACTTCCACCTCTTCAGGGTAATTTTAGCCAAGAAGTGCCTAAAGTTCAAAAGGCACATGTTATCTGTTGTGCTGCCAGGTCACAGCTTGGTTATGGTAAAGCTTTGGCATCAAGGTCACATAATGCCCTGAGGCTTTCTGTCACACAACAATCTGAAGCAAGGTCAATAAGATATAGGAGAATGACTTGTGTCAATGCTGCAGACAAAGTTCTAGAGCTTCAAGCCAAGGTGACTAGCAAATGTTTCTTTGATATAGAAGTTGGGGGTGAGAAAGGATATGGTTACAAAGGAAGCTCCTTCCATCGTATAATAAAAGATTTCATGATTCAGGGAGGAGACTTTACAGAAGGAAATGGAACTGGTGGAACTAGTATCTATGGTCCTAGTTTTAAAGATGAGAGTTTTTCCTTGAAGCATATTGGTCCTGGAGTTTTGAGCATGGCAAATGCTGGTCCTAATACCAATGGTAGTCAATTTTTCATTTGCACTGTAAAGACTCCATGGCTAGACAATCGTCACGTTGTATTTGGACATGTAATTGATGGAATGGATGTTGTTAAGACACTAGAATCACAGGAGACGAGTAGGTTAGATGTCCCTCGGAAGCCTTGCAGGATTGTTAATTGTGGAGAGCTGCCTATAGATGGTTGATCATTATGTAGAAGTATATAACTTTCTTCTGATTTTCAGTTAATTTCCAATTTTCAGATTGTTTCTTGTTAATCATGTTAATGTGTTTGAGTTCATTAGTGGCTTCCAAGTTGGTTGACTTCCGGAGACACAGTGGAGATCCCGCACCCATATTTTGTTAATTAGACTCGTATTTAAAAAATCCTTATAATAGTATTCTCTTTTCCATATCTTAATTTCTATTTTTTTATTTTTTTTGCATTTACGTGCTCCGAGCAATATGATTTACATTTTTAAACATCAGCATTTGTGTGGAGACAACTGCTGTGGACCATGGCTGGGATTGCTCAGCAGGTAAAATTGGTTTCTTGTTCAAAGCAAAATCTATGCAAGGACCATGGTTTCAACTGCTGGGGATTGGATCATTTGCTGCTGGTCTCCCTCAATCTCCCATATTTCCGGTAGTGCTTCTTTGATATTATGAATGCTGTTCAGTGCATGGTCAGCACCAGGCACCAAATCTGAGCTACCTACCTGTCACCAGAGTGTTAACTTTTATTAGATATTTAAATAAAGTATGGAACCATTTAATTTCTTAATTTCCAAATACTGATGCATAAATTGTAAATTATAGCTTACTATAACCGTGTTAAGTCCTGCAGCTTTCCCA 1398 0.3848 MASSLSAQLVQCRNSLPPLQGNFSQEVPKVQKAHVICCAARSQLGYGKALASRSHNALRLSVTQQSEARSIRYRRMTCVNAADKVLELQAKVTSKCFFDIEVGGEKGYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGTSIYGPSFKDESFSLKHIGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVKTLESQETSRLDVPRKPCRIVNCGELPIDG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02895 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 110 127 IPR020892 GO:0003755|GO:0006457
Pste5g02895 231 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 79 227 - -
Pste5g02895 231 SUPERFAMILY Cyclophilin-like 102 227 IPR029000 -
Pste5g02895 231 PIRSF Peptidylpro_ismrse 21 51 IPR024936 GO:0003755
Pste5g02895 231 PIRSF Peptidylpro_ismrse 78 230 IPR024936 GO:0003755
Pste5g02895 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Pste5g02895 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 IPR002130 GO:0000413|GO:0003755
Pste5g02895 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Pste5g02895 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 158 173 IPR002130 GO:0000413|GO:0003755
Pste5g02895 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 90 226 IPR002130 GO:0000413|GO:0003755
Pste5g02895 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 86 227 - -
Pste5g02895 231 Gene3D - 80 230 IPR029000 -
Pste5g02895 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 109 225 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02895 Pste-Chr5 21679919 21683452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02895 105 224 U-box Gene Family AT5G67530 47.934 1.47e-27 108