Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02890 CGAGAATCGAGATTGTGTATAAAACAAATAACGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGCGAGCGAGCTTGGACTTAGAGTTCGGAGCTGGCTGGTGGGGAGAATGAAGGTGGTTCTAATAGCATTTACCTTGGTTTGTGTGGTTTTGAAGGCTGGATCTGAGCCTCCACATTATTTCTTCGAGAACGATGCGGCGGCAGCGCCCGGACCTCCACCCCTCATGGTCCCCCTCACTCTTATTCAGGGAGCTGCTTCCAAAGGAGCCGTTTGTTTGGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATCTGGTTCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTCTTTAGAAAAACTACTCGTCGTGGTTCCTCAAAATACATGGAAAAGCAACTACCATTCACGGGAATATTAAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGACGGGGCATCTTTCACTGGAGATAGTCAAAACGAGGCTGCTCAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGGAAGAATTATTGTACAAGGGAATGCAGAAGGCCAACGAGGCTCTGTTGTCTGGATGCTCTGCAGGTGGTTTGGCATCTATAATTCATTGTGATGAGTTTCGAACCTTGCTTCCTGCATCCACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTCGTAGATGCAGTTGATGTATCGGGGGGTCACACACTGAGGAATCTGTTTGGAGGTGTAGTTAACTTACAGTTCTCTTATATATGGTTTAGAAAAACTTGTATAAATATGCCATGTCATGATGTTGTTGAAACTGTAGGAAGTGCAAAAAAATCTGCCAAAAAGTTGTCTCAACCAACTGGACCCGACTTCGGTAATTTTTATATTCTGGATTGCTTTTTTCCTCAGAATTTGATCAATCATGTTGATACTCCACTTTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGTCCCACGTTCAGCAGATCCCCATGGCTATTGGAATGATTGCAAATCAAATCATGCACGCTGTAATTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAACCAAATGCTAAATGACATGAAAGGCTTCTCAGGGACATCTCAATCCGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCGCTTATTAAAAACGTGCCAATTGCAATTGCTGTTGGAGACTGGTATTTCGATCGGAAAACTATCAAAGCTATCGACTGTCCTTACCCCTGTGACAATACCTGTCATAATCTGGTCTTCAATGCTGGTAAATCTGCTGTGGTGGACTACCAGTCCTCAAGTGATGACACATCTACCATGACCATGATATATTCTCGCTCTACGAGGCTGACTTTTAGTACTGGTCTATATATTCTAAGTGTTTTGTTGCCAATTACATGGTCCTCTTAGTGCACAGTGCGCAGTTTTAGCCCCAAAAGCAATGTACTATGGTTAGGTTCTTTTGTCCATGTTCGATCTCCCATCTTAAGGCTCTCTATCTCAGTTATTAATTACACGTTAAGAGTCAGCAATAGAATTTTTAGGGCTCTAAGATCCAATTTGGTTGAAGGAAGAACAACCTGTAACTATGTAGGTTCTTCTATTCTTCTAAATAGTTGTAGTCCCATTAAATGGCTCACCTTGTGATCCTATGTTTTTTTTTTTAATAAGTTAAATATTAGTTATTAATGTATTAATTTTTGTTAGCA 1860 0.4156 MKVVLIAFTLVCVVLKAGSEPPHYFFENDAAAAPGPPPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGSGSGANSWLIQLEGGGWCNTIRNCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSQNEAAQLQFRGQKIWQAAMEELLYKGMQKANEALLSGCSAGGLASIIHCDEFRTLLPASTKVKCLSDAGFFVDAVDVSGGHTLRNLFGGVVNLQFSYIWFRKTCINMPCHDVVETVGSAKKSAKKLSQPTGPDFGNFYILDCFFPQNLINHVDTPLFLLNAAYDAWQVQESLVPRSADPHGYWNDCKSNHARCNSSQIQFLQDFRNQMLNDMKGFSGTSQSGLFINSCFAHCQSERQDTWFADDSPLIKNVPIAIAVGDWYFDRKTIKAIDCPYPCDNTCHNLVFNAGKSAVVDYQSSSDDTSTMTMIYSRSTRLTFSTGLYILSVLLPITWSS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02890 481 PANTHER NOTUM-RELATED 12 429 IPR004963 GO:0016787
Pste5g02890 481 Pfam Pectinacetylesterase 39 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02890 Pste-Chr5 21659378 21665435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02890 1 439 Carbohydrate Esterase AT3G62060 61.111 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02890 5 21659378 21665435 Pste4g01404 4 10473727 10478842 PCT