Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02886 CTCCTTTTCTTAGCTGCCACTTCATTTTCCTGTCTTCAATTAATAAAATCTCTCTTGCTCTCAGAATCTGGTTCAGTGCCACTCCTGCTGACATTTCACCACAAGTTCTATTGAACAGCCCATCAGTTAATTGGAAAGGTTTACCCCTCATTGTTGGTGGGGGAAGAACTACCAGAAACTACAAATGGGAAGGCACTCCTGCTGTTACAAGCAGAAACTTAGGAAGGGTCTTTGGTCACCTGAGGAGGATGAAAAACTTCTGAGGCATATAACTAAGTATGGTCATGGATGTTGGAGCTCAGTTCCAAAGCAAGCAGGTTTGCAGAGGTGCGGCAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAGAGAGGTACATTTTCACAAGAAGAAGAAAATCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGATGGTCTCAAATTGCAGCACAATTGCCAGGGAGGACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCCTAAAGAAGAAACTGAGGCAAAGAGGTATAGACCCTGTCACACACAAGCCACTGTCAGGGGTTGAGAATGGGGAGGAGGAGGACAAAACAAGGAGCCAGGAATTATCCAACGAATTGAACCTCCTGAATTCAGAGAGCTTCAAGTCAGATGAAGGGTCCTATGAGCAGAGAGCATCCTCTTCAATTACCCCCAAAGCCTATGAGATGGAAGGTTCGTGCAGCTCCAAGATTAACACCAAAAACGACACCGACTTGATAGCCAATTGTTCCAACAAAGACTTGTTTCTAGACGGCTACACCAGTAGTTGCCAAGCCTCAGATTTGATGGAAAATTACACACTTCAGATCACTGACTCTCTTCCAACCAATTCATACTCTTGCCATTGGTTCAGTCCAACTGCAAGACCCTTTGATATGAACTGTGAGTTTAATTCCAATGTGATGTCCATTCTTCCACCTACAACAACCTCATTTCTCCCTAATACTTTTTGCTACAAGCCATCACTTGCTGTCCCTTCAGAAGATATTTCAACAGCCTCTTATACTTTAAATGGACCCAATTACTGGGAAGCCAGTGCCTCCAACAACAGCAATGGAAGCAACACAAGTGATGGCAGCAGAGAGTTGACAAGTGGCAAGAGCAGTGTCATCTCATCTTGGGGATTGACAGAAGAAGCAAAGTGGTCTGAGTACCTCCACAACCCAATGTTAATGCTGGCAGCTCCTGACTCATTGTGCAACCAAATTAGGCCAGCCACGCATTTGGTATCTGATGAAACTTTAGGGGCAATATTGCCTGATTCCAAGGAGCAACAACAACCGTCCCAAACTTCTACCATCTTCTCCAAGGACATCCACAAGCTAACAGCAGCCTTCGGACATATATAGCACCGGCCTTTGACATAATGAAATATTTTAGAAGGGTTCCAGGGGATTTATTTCTGTTATTAGTACAGGTGTGTGAAATCACAGATTAATTTTGCTCTTGTATATCGGTTAGGTCTGTCAAAAACATTTCATTTTGGTAATATTTGTGAGCCAAATCATTTGTCTTTTTACCTTCTCCGGTGGAATATAAGGATTGCTCTGC 1607 0.4325 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSGVENGEEEDKTRSQELSNELNLLNSESFKSDEGSYEQRASSSITPKAYEMEGSCSSKINTKNDTDLIANCSNKDLFLDGYTSSCQASDLMENYTLQITDSLPTNSYSCHWFSPTARPFDMNCEFNSNVMSILPPTTTSFLPNTFCYKPSLAVPSEDISTASYTLNGPNYWEASASNNSNGSNTSDGSRELTSGKSSVISSWGLTEEAKWSEYLHNPMLMLAAPDSLCNQIRPATHLVSDETLGAILPDSKEQQQPSQTSTIFSKDIHKLTAAFGHI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02886 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste5g02886 406 PANTHER MYB DOMAIN PROTEIN 55 1 329 - -
Pste5g02886 406 SMART sant 13 63 IPR001005 -
Pste5g02886 406 SMART sant 66 114 IPR001005 -
Pste5g02886 406 CDD SANT 17 61 IPR001005 -
Pste5g02886 406 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste5g02886 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste5g02886 406 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pste5g02886 406 MobiDBLite consensus disorder prediction 123 146 - -
Pste5g02886 406 FunFam Myb transcription factor 11 67 - -
Pste5g02886 406 Gene3D - 11 67 - -
Pste5g02886 406 MobiDBLite consensus disorder prediction 131 145 - -
Pste5g02886 406 CDD SANT 69 109 IPR001005 -
Pste5g02886 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste5g02886 406 FunFam MYB transcription factor 68 140 - -
Pste5g02886 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste5g02886 406 Gene3D - 68 145 - -
Pste5g02886 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02886 Pste-Chr5 21588045 21589832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02886 1 157 MYB Transcription Factor Family AT4G01680 84.076 8.86e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste5g02886 Myb_DNA-binding 1.9e-14 CL0123