Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02881 CAAAAAGTTCAAGAACATTGGAAGAATCTTGAGCCTTTGTTTACAACTGTAAAGTCATTAATATCAAGGAGGGAGCCTTTGCAGACCGAGAAAAAGGTCAATATACTTTCTTCAAGACTTGATAACCCTTGCTGTAAGTTTAGTGGTTTCCCAAAAGGTATGGTAGAAAAGGATCATGTCAACAACACAGACTTATCATTAGTAAAAGGCATTAGCATTCCATCCATGGAGAAAATACCACCATATACATCTTGGGTATATGTGGCTAGAAATGAGAGAATGGCCGAAGATCAAACGGTTATTGGGAAATATCAAATGTACTATGATAAGAATAGAGGTGAAATGGTTATATGCAGTGACAGTGATGAAGAGATAGTAAACTCCGATGATGTTAAACATGAATTCACCGAGGCTGAAGACCGAATTCTATGGATGACAATGGAGGAATATAAGTCTACTAAAGAGGATAGGTATAAAAAACTGAAAGAAATGAATAAGGAGAGTTTGGATCAACATTTTGAAGACTGTAATTGTAGTGGATGTGAAAATAATCTTGGAATATGTTTGAAGAAAAGCTTGAGTTTTACTTTAGAAGCTTTCAATAAACTTTTTTGTCGTCGATGCCTGGTTTTTTCCTGTCTTGTCCATGGCATTGATCAACCTTTAATATATCATAGTGAAAAACAACCAGTTTGGTATGAACTTGAAGGTGATAGGCAACCATGCAGTGATCAATGTCACCTTCTGTTTAAAGAAGATGTCAAGATTTTGTCAGAAAATTTGACCCAACAGTCTTTGTATCATAAGAGAATTACACCAATGGAAGAAGAATCAGCATTACCTCCTATCGAGCCTCACAATTATTGTAATAAGTGGAAGACAATTTCAGATGATATAGTTACCAATGCTAATGGCGAACAAAACCACACAACATGTCATGCATCTTTGGAAAGTATTATTGAACATACTTCAAAGAAATTAACCGTTTCTGGTAGATTTGTTCAAGATGATCAAAATAATAAAGTTGTAGATGGACAAAAAGATCTTGCTAATGAGATAGAATTCAACGTAATGTCCCTTTCGAAGGAGGTGCAAGCTAATAAGAAGACAAATGACTTAGATTGGAGACCTCTTGAGAGAGATTTATATTTGAAGGGAGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCACTACCTTACTTCCTAGCTTAAAAACTTGCTTGGAAGTAGCTAGGTACATGTATGATGGTGGAGAGTCAATGACTCATGGATCCATACCAACTTCAATCATGAGCAGATATGAAAAAATCTATACGGAGTGCAGAGTCCAAGAAACCCCATCAAGGACGCGATCACAAAGAAAAAAGGGCAAACCTAAGAAGTTCAATTATTCTCGAAAATCTGCTGGCCTTCCACCTAGATGGAGAAAAATTGCTTATGGGCAAAACCAATGTAATAAGCAGTATACTCCTTGTGGGTGTAATGGAATGTGTGGAAAGCAATGTCCTTGTCTTCTCAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTTTGCAATAATCGATTCAGAGGGTGCCATTGTGCTAAGAGTCAATGCAAAAGTCGATTATGCCCATGTTTCGCAGCAAACCGTGAATGTGACCCAGATGTTTGTCGAAATTGTTGGATTAGTTGCGGTGACGGTTCATTAGGGGAGCCACCTCGACGTGCAGATGGTAAATGTGGAAACATAAATCTTCTTGTAGGCCAAAAAGAAAGGATTCTTTTGGCAAAGTCAAATGTTATAGGATGGGGAGCCTTTGCAAAGAACCAAATTAACAAAAATGCTTGTCTAGGAGAGTACACAGGTGAACTTATCACTCCTAAAGAAGCAGAAAAGCGTGGAAAGTTATACGACCGTATAGATATTTCCTTTCTATTTAACCTTAATGACCAGGCAAATTTTTTTCATGCACTTTTCTCATCAATCTGCCTCCCTTGGGTTATTGATGCTTGTCGCCTAGGAGACAAGTTAAAATTTGCAAATCATTCATCAAAACCAAACTGCTACGCAAAGGTTATGCTTGTTGGAGGAGATCATCGAGTTGGCATATTTGCCAAGGAAAACATTGCAGCTGGTGATGAGATTTTTTATGATTATTGGTATGATCTAGATTGTGCACCATCATGGGCTATTTCACCTGAAGATAAGGTTTCTAAGAAAGATGAATTAACTATTTCTCAAAACAAGGCAAGGAAACATTAA 2256 0.3715 QKVQEHWKNLEPLFTTVKSLISRREPLQTEKKVNILSSRLDNPCCKFSGFPKGMVEKDHVNNTDLSLVKGISIPSMEKIPPYTSWVYVARNERMAEDQTVIGKYQMYYDKNRGEMVICSDSDEEIVNSDDVKHEFTEAEDRILWMTMEEYKSTKEDRYKKLKEMNKESLDQHFEDCNCSGCENNLGICLKKSLSFTLEAFNKLFCRRCLVFSCLVHGIDQPLIYHSEKQPVWYELEGDRQPCSDQCHLLFKEDVKILSENLTQQSLYHKRITPMEEESALPPIEPHNYCNKWKTISDDIVTNANGEQNHTTCHASLESIIEHTSKKLTVSGRFVQDDQNNKVVDGQKDLANEIEFNVMSLSKEVQANKKTNDLDWRPLERDLYLKGVEMFGKNSCLIATTLLPSLKTCLEVARYMYDGGESMTHGSIPTSIMSRYEKIYTECRVQETPSRTRSQRKKGKPKKFNYSRKSAGLPPRWRKIAYGQNQCNKQYTPCGCNGMCGKQCPCLLNGTCCEKYCGCSKLCNNRFRGCHCAKSQCKSRLCPCFAANRECDPDVCRNCWISCGDGSLGEPPRRADGKCGNINLLVGQKERILLAKSNVIGWGAFAKNQINKNACLGEYTGELITPKEAEKRGKLYDRIDISFLFNLNDQANFFHALFSSICLPWVIDACRLGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIAAGDEIFYDYWYDLDCAPSWAISPEDKVSKKDELTISQNKARKH 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02881 751 MobiDBLite consensus disorder prediction 447 468 - -
Pste5g02881 751 CDD SET_EZH 589 719 - -
Pste5g02881 751 SMART set_7 589 726 IPR001214 GO:0005515
Pste5g02881 751 Pfam CXC domain 528 559 IPR041355 -
Pste5g02881 751 Gene3D SET domain 490 719 IPR046341 -
Pste5g02881 751 ProSiteProfiles CXC domain profile. 476 575 IPR026489 -
Pste5g02881 751 Pfam SET domain 600 717 IPR001214 GO:0005515
Pste5g02881 751 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 22 737 IPR045318 GO:0006338|GO:0042054
Pste5g02881 751 Coils Coil 147 167 - -
Pste5g02881 751 SUPERFAMILY SET domain 465 721 IPR046341 -
Pste5g02881 751 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 34 750 IPR025778 GO:0031519
Pste5g02881 751 FunFam Putative histone-lysine N-methyltransferase EZH2 490 720 - -
Pste5g02881 751 ProSiteProfiles SET domain profile. 589 718 IPR001214 GO:0005515
Pste5g02881 751 SMART CXC_2 524 561 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02881 Pste-Chr5 21483974 21491216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02881 578 717 C2H2 Transcription Factor Family AT2G23740 30.556 7.09e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste5g02881 SET 1.6e-13 No_clan