Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02857 ATGCAGTTCAATCGCCTCTGCATAGTTTTACCACCAAAATCTGGTGAAATAGTGGTGCCACTTGAAAAGGGTGTCCAACAAGAACACTTTCAAACACCACAGAAACAAGTTGAGGCCAAACAAGCACACAGGGCTTGTGGGGGACAAGTTCGTGCTTTGCTTCGTGATTCTTGGAGCAAGTTATATGACTTGGGGTGGTGGAGAATTTGTCAAAATGGAGAGCACAAAGAGAAGAACAACTCTGGTGTGTTGTTTCATGACATGGATGGTGTGCAAGTTTCTGTCAATATTGGTAGAGACAACCCCAGAATTTTCAGCTATGCTGAGCTCTTTATAGGCTCCAATGGTTTCAGTGAAGACCAAGTTCTAGGGAGTGGAGGGTTTGGGAAAGTTTACAAAGCTGTTTTGCCAAGTGATGGAACTGAGGTTGCTGTGAAGTGCTGTTTGGCAGAGAAAGGAAAGCAATTTGAGAAGAGTTTTGCAGCTGAGTTAACAGCTGTGGCTGATCTTCGCCACAAGAATCTTGTGAGGCTGAGGGGTTGGTGTATCCATGAAGATGAGTTGCTTCTTGTTTATGACTACATGCCTAACCGAAGCCTTGACCGTGTACTATTTCGCAGGAAGGCTAAGCCTCTTGAATGGGGACAAAGAGGGAAAATTGTGAAAGGTTTGGCAGCAGCATTGTACTATCTACATGAGCAACTAGAGACTCAAATCATTCATAGGGATGTTAAGACCAGCAATGTGATGCTTGATTCCCAGTTGAATGCTCGGTTGGGTGATTTTGGCATGGCAAGGTGGCTAGAGCATGAGCTTGAGTATGAGTATAAGTATAAGTATAACAATGAGCAAACAATTTCAACCAGAAGTGGTCATTTCAGGTTGGGAGAGACATCAAGAATTGGTGGCACAATAGGGTATCTTCCACCTGAAAGCTTGCAGAAGCAAAGCCATGCTAATTCCAAATCTGATGTCTTCAGTTTTGGGATTGTCGTGCTTGAGGTGGTGTCTGGAAGGAGAGCAATAGATATCACATACCCAGATGAGCAAATCATTTTGCTTGACTGGTTCAGAAGGCTTTCTGATGAAGGGAAGCTTCTAGAAGCAGCTGATACTCGATTACCGGATGGATCCTACAAGCTTCCAGAGATGCAGCATTTCATTCACATAGGCCTACTCTGCACACTCCATGACCCCCAATTGAGGCCAAACATGAAATGGGTAGTGGAAGCACTTTCTGACATTTCTTTCAAATTACCATCACTCCCTTCTTTCCTTTCCCACCCTCTATACATCTCTTTGCCTTCCCCAACTAATACTAGCCAAAGTCCTAGCAGCACAAGTGGCACTAGCTCCACCACAGATAATGCTAGCATAACCACCAACTATACTTCATCAATCTATGTCACAGCCGCAGGTGAAACTGTGTATCTCACTGCTGAGTACAAAAACAGTGAAATCATATCTTCTAAGAGCATGAATCACCAGAAACTATTTCCTGTGGTTGAAACTCCAAGGGAAATATCATACAAGGAGATTGTTTCTGCTACAAATAACTTCTCAGATTCAAGAAGGGTTGCTGAGCTAGACTTTGGAACTGCTTACCATGGCATTCTTGATGACAAGTGTCAGGTTTTGGTGAAACGCCTTGGGTTGAAGACATGTCCTGCATTGCGTGATAGGTTTTCCAATGAACTCCGGAATCTAGGACGGCTTCGCCACAGGAATTTGGTTCAGCTTCGTGGTTGGTGCACTGAGCAAGGAGAGATGCTTGTTATTTATGATTACTCAGCAAGTAGAATTCTCAGCCAACAGCTTCTGCACCATAACAATGGAAGTAGAACTAGGGGTTCTGTCCTCAAATGGCATCACAGATACAACATAGTGAAAGCACTGGCCTCTGCAGTTCTCTATCTTCATGAGGAGTGGGATGAACAAGTGATCCACCGAAACATTACCTCTTCAGCTGTCATTCTTGAACCAGATATGAACCCAAGACTCAGCTCTTTTGCTCTAGCTGAATTTTTGTCAAGGAATGAGCATGGTCATCATGTAGTCTGTGACACTAGAAAATCAGTTCGAGGGATTTTTGGTTACATGTCACCGGAATATGTGGAATCAGGTGAAGCAACCACTGAGGCTGATGTTTATAGTTTTGGTGTGGTGGTACTTGAAGTTGTTAGTGGATTGATGGCAGTGGATTTTAGGCAGCCAGAGGTGCTTTTGGTGAAGAAGGTTCATGAATTTGAGATGAGAAAAAGACCATTGAAGGAATTAGCTGATATAAAACTCAATGGAGAGTATAATGATCAAGAATTGATGAGATTAGTAAGGTTAGGAATTGCTTGCACCCGTTGTAACCCACAGTTAAGACCAAGCATGAGAAAAATTGTAAGAATCCTTGATGGCAATGACAAATTACTTGTGCAAAACATCAAGGAGAGCAGGGAAGAATGGAGAGAAAGAAATGATTGCTCTTTGTCAATGATTAGGAGAATCCAAGCTTTAGGAATACAGTAA 2520 0.4294 MQFNRLCIVLPPKSGEIVVPLEKGVQQEHFQTPQKQVEAKQAHRACGGQVRALLRDSWSKLYDLGWWRICQNGEHKEKNNSGVLFHDMDGVQVSVNIGRDNPRIFSYAELFIGSNGFSEDQVLGSGGFGKVYKAVLPSDGTEVAVKCCLAEKGKQFEKSFAAELTAVADLRHKNLVRLRGWCIHEDELLLVYDYMPNRSLDRVLFRRKAKPLEWGQRGKIVKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQLNARLGDFGMARWLEHELEYEYKYKYNNEQTISTRSGHFRLGETSRIGGTIGYLPPESLQKQSHANSKSDVFSFGIVVLEVVSGRRAIDITYPDEQIILLDWFRRLSDEGKLLEAADTRLPDGSYKLPEMQHFIHIGLLCTLHDPQLRPNMKWVVEALSDISFKLPSLPSFLSHPLYISLPSPTNTSQSPSSTSGTSSTTDNASITTNYTSSIYVTAAGETVYLTAEYKNSEIISSKSMNHQKLFPVVETPREISYKEIVSATNNFSDSRRVAELDFGTAYHGILDDKCQVLVKRLGLKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVIYDYSASRILSQQLLHHNNGSRTRGSVLKWHHRYNIVKALASAVLYLHEEWDEQVIHRNITSSAVILEPDMNPRLSSFALAEFLSRNEHGHHVVCDTRKSVRGIFGYMSPEYVESGEATTEADVYSFGVVVLEVVSGLMAVDFRQPEVLLVKKVHEFEMRKRPLKELADIKLNGEYNDQELMRLVRLGIACTRCNPQLRPSMRKIVRILDGNDKLLVQNIKESREEWRERNDCSLSMIRRIQALGIQ 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02857 839 SUPERFAMILY Protein kinase-like (PK-like) 492 801 IPR011009 -
Pste5g02857 839 Gene3D Phosphorylase Kinase; domain 1 89 194 - -
Pste5g02857 839 FunFam Receptor like protein kinase S.2 91 194 - -
Pste5g02857 839 Pfam Protein kinase domain 118 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02857 839 Pfam Protein tyrosine and serine/threonine kinase 526 800 IPR001245 GO:0004672|GO:0006468
Pste5g02857 839 MobiDBLite consensus disorder prediction 437 456 - -
Pste5g02857 839 PANTHER - 81 414 - -
Pste5g02857 839 FunFam Receptor like protein kinase S.2 195 418 - -
Pste5g02857 839 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Pste5g02857 839 FunFam Receptor like protein kinase S.2 598 824 - -
Pste5g02857 839 SUPERFAMILY Protein kinase-like (PK-like) 101 453 IPR011009 -
Pste5g02857 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pste5g02857 839 Gene3D Transferase(Phosphotransferase) domain 1 195 420 - -
Pste5g02857 839 Gene3D Transferase(Phosphotransferase) domain 1 603 826 - -
Pste5g02857 839 Gene3D Phosphorylase Kinase; domain 1 479 596 - -
Pste5g02857 839 ProSiteProfiles Protein kinase domain profile. 117 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02857 839 ProSiteProfiles Protein kinase domain profile. 520 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02857 839 SMART serkin_6 117 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02857 Pste-Chr5 21261213 21263732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02857 510 807 Receptor kinase-like Gene Family AT3G53810 37.500 6.70e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste5g02857 PK_Tyr_Ser-Thr 7.2e-28 CL0016