Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02854 TTTATATTATATTTATTCTAAATTTACATTTTATGCTTAAAATGATCGAGATTGGTTCAAAAAGCTAATCCTGACAAATATATTTTTTTAATAGATATAAGTATGAAATTCAACTTGACATAGTTAAAAGTAGTAATTAACTAAGTTGTTAACTTTTACAAGATTAACAATGGATATGTTCTTTTTGTGCTTATTTGATGATTGTTTTGATGGCGGCTTTGGAAAAATGCAGGGCAATACTCGAAAACCAGAACCAGTCTAAGGGTTGCAGTCATCAGACGTGGCGTGGGGCCCCTTGGAAGTGATGACTGTGTTTGGTGGCTGAGTGGCAAAAGCAATGATACAATAATGAAAGTTAAAAAGCATTGTGAAACTCCGCAAAGGCCGTAACATCCACACCAATCTCATCTTGGGCGATGGAGGAAGACCCATTTCTCACATCCACTTCCCAACGCGCGGATTTACCCTTGCTGTCATCCAAGTCCTTCAACGACGTCACGACCCCACGCGACGAGATTGAGTCCTCGCAACCTCAGTATCACCCGAAGAAGAAAAAACTGAGCCGCTGCAAGACAGCACCGGCCATGGTGACCATGCGAGACCTGAAACCCAAGACACCCAAAGTCCCCAAACCTCAATCTAGTTCGATCATCCGACAGGGCATGTGGTTACTCGCCCTTTACCTCTCGGTGGGAGTGGTGATTTACTCTTTCAACAGGGACTGCTTTTCCGGCATCGAAACTTACCCTGTTGTCGACGCCCTTTACTTTTGCATTGTTACCATGTGTACCATTGGCTACGGGGACATAGCACCCTTAACCCCGCTTACAAAGCTCTTTGCTTGCATTTTTGTGTTGGTGGGGTTTGGCTTTATAGACATACTCCTGAGTGGGCTTGTGAACTTCGTTTTGGATTTGCAAGAGAACATGATTCTGACGGGGCTCCAAATGGGTGCAAGTGCCAGTGCCAGTTCCAGGGAAGGGTTCTCGGCCAGGAATTACATCGTGGATGTGGCCAAGGGAAGAATGCGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTGGTCTTGTGTATTGGGATTGGAAGTTTGGTGTTGTTCTTTGTGGAGGGTTTGGATTGGGTTGATTCTATTTACTTGTCCGTTATGTCTGTCACAACCGTCGGGTATGGTGACAGAGCCTTCAAGACCCTTCCTGGTCGCTTATTTGCTGCTATTTGGTTGCTCTTTTCTACTTTGATGGTCGCCAGGGCTTTCCTCTATTTAGCAGAGGCCCGAATCGATAGAAGGCATCGCAGAATGGCTAAGAAAGTGCTCCATAGGGATATTACTGTTGAGGATTTGCTTGCTGCTGCTATCAACAACACTGGTTTCATCAGCAAGTCAGAATATGTAATCTTCAAACTGAAAGAGATGGGAAAGATACAGGATAAAGATGTGTTGCAAATTTGTGACCAATTCAGGAAGCTTGATCCTTCTAACTGTGGGAAGATAACACTACCTCATCTCTTGGGGGACAGTTTATGACCAAGTAAAGCAAAATCAACTGATATATGAATACACAATTGTTTCAGTACAGACGCTTGCAAGTGGCAAAGCATTATTTTTTCACAAGGACGATCCGGGAAAGATAATATTCGCTTCAAATGTTGATAAATATTTATCCTTAGGACTTACGAGTGATAGTGATTGAATTATTTGGAGAAATGTGTTGTACAGAAATGACATCGTTTATAGAGGTGGTTTTAAACCATGAATACAGAAGGAAGTTACTAGAAGGAAAAAAGAAAGAAAGGGTCAAAAGGGACCAATCATTCTGAACTGATTCCGG 1833 0.4283 MEEDPFLTSTSQRADLPLLSSKSFNDVTTPRDEIESSQPQYHPKKKKLSRCKTAPAMVTMRDLKPKTPKVPKPQSSSIIRQGMWLLALYLSVGVVIYSFNRDCFSGIETYPVVDALYFCIVTMCTIGYGDIAPLTPLTKLFACIFVLVGFGFIDILLSGLVNFVLDLQENMILTGLQMGASASASSREGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLFFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHRDITVEDLLAAAINNTGFISKSEYVIFKLKEMGKIQDKDVLQICDQFRKLDPSNCGKITLPHLLGDSL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02854 370 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 112 343 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste5g02854 370 Gene3D - 58 177 - -
Pste5g02854 370 Gene3D - 193 313 - -
Pste5g02854 370 FunFam Two-pore potassium channel 3 193 307 - -
Pste5g02854 370 PRINTS Two pore domain K+ channel signature 121 149 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste5g02854 370 PRINTS Two pore domain K+ channel signature 248 257 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste5g02854 370 MobiDBLite consensus disorder prediction 7 36 - -
Pste5g02854 370 MobiDBLite consensus disorder prediction 1 46 - -
Pste5g02854 370 SUPERFAMILY Voltage-gated potassium channels 75 164 - -
Pste5g02854 370 SUPERFAMILY Voltage-gated potassium channels 201 311 - -
Pste5g02854 370 Pfam Ion channel 85 164 IPR013099 -
Pste5g02854 370 Pfam Ion channel 218 286 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02854 Pste-Chr5 21230349 21232789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02854 21 370 Ion Channels AT4G01840 65.625 1.04e-162 460